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* profiles: mask sci-biology/{samri,ants} depends on non-existent vtk versionAlexander Puck Neuwirth7 days1-0/+8
| | | | Signed-off-by: Alexander Puck Neuwirth <alexander@neuwirth-informatik.de>
* */*: rename account andrewammerlaan -> nowaNowa Ammerlaan2024-11-122-2/+2
| | | | | Bug: https://bugs.gentoo.org/940905 Signed-off-by: Nowa Ammerlaan <nowa@gentoo.org>
* profiles: unmask ant-core revdepsAlexander Puck Neuwirth2024-11-091-7/+0
| | | | | Signed-off-by: Alexander Puck Neuwirth <alexander@neuwirth-informatik.de> Closes: https://github.com/gentoo/sci/pull/1294
* profiles: mask ant-core revdepsAndrew Ammerlaan2024-10-301-0/+7
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* dev-python/bedtools: move from sci-biology, version bump 0.10.0Michael Schubert2024-07-191-0/+1
| | | | | | Signed-off-by: Michael Schubert <mschu.dev@gmail.com> Closes: https://github.com/gentoo/sci/pull/1285 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* dev-python/pyfaidx: version bump 0.8.1.1Michael Schubert2024-07-191-0/+1
| | | | | Signed-off-by: Michael Schubert <mschu.dev@gmail.com> Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* profiles: mask sci-biology/BBmapAndrew Ammerlaan2024-07-181-2/+3
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-biology/multiqc: version bump 1.22.2Michael Schubert2024-06-191-4/+0
| | | | | | Signed-off-by: Michael Schubert <mschu.dev@gmail.com> Closes: https://github.com/gentoo/sci/pull/1277 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* profiles: unmasked samri, heudiconvHorea Christian2024-05-091-4/+0
| | | | Signed-off-by: Horea Christian <chr@chymera.eu>
* profiles: unmasked nipypeHorea Christian2024-05-091-2/+0
| | | | Signed-off-by: Horea Christian <chr@chymera.eu>
* package.mask: mask multiqc and nipypeAndrew Ammerlaan2024-04-241-0/+13
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* profiles: unmasked packages with formerly missing depsHorea Christian2024-03-221-7/+0
| | | | Signed-off-by: Horea Christian <chr@chymera.eu>
* profiles: unmasked packages with formerly missing depsHorea Christian2024-03-211-4/+0
| | | | Signed-off-by: Horea Christian <chr@chymera.eu>
* mask packs with incomp depsAndrew Ammerlaan2024-03-151-0/+3
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* mask packs with incomp depsAndrew Ammerlaan2024-03-151-0/+8
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* dev-python/cadquery*: treecleanAndrew Ammerlaan2024-03-081-7/+0
| | | | | | | | | Needs bump and port to newer python targets Work on-going in: https://github.com/gentoo/sci/pull/1211 Possibly re-add later. Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* dev-python/{numba*,llvmlite}: treecleanAndrew Ammerlaan2024-03-081-11/+0
| | | | | | llvmlite is *still* stuck on llvm:14 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* dev-python/pytorch-lightning: treecleanAndrew Ammerlaan2024-03-081-4/+0
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-physics/lhapdf-sets: Add more PDFsAlexander Puck Neuwirth2024-02-271-1/+3
| | | | | Closes: https://github.com/gentoo/sci/pull/1248 Signed-off-by: Alexander Puck Neuwirth <alexander@neuwirth-informatik.de>
* profiles: mask dev-python/pytorch-lightningAndrew Ammerlaan2024-02-271-0/+4
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* profiles: heudiconv package no longer affected by dropped dependencyHorea Christian2024-01-221-4/+0
| | | | Signed-off-by: Horea Christian <chr@chymera.eu>
* profiles: samri package no longer affected by deprecated dependencyHorea Christian2024-01-221-1/+0
| | | | Signed-off-by: Horea Christian <chr@chymera.eu>
* profiles: removed old package version with dropped dependencyHorea Christian2024-01-221-1/+0
| | | | Signed-off-by: Horea Christian <chr@chymera.eu>
* profiles: mask reverse deps of numbaAndrew Ammerlaan2023-12-291-0/+4
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* profiles: mask llvmliteAndrew Ammerlaan2023-12-291-0/+7
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* profiles: mask sci-libs/nipypeAndrew Ammerlaan2023-12-181-0/+6
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* profiles: nptyping reinstatedHorea Christian2023-12-011-5/+0
| | | | Signed-off-by: Horea Christian <chr@chymera.eu>
* sci-physics/lhapdf-sets: new package, add 0Alexander Puck Neuwirth2023-10-282-0/+18
| | | | | Closes: https://github.com/gentoo/sci/pull/1219 Signed-off-by: Alexander Puck Neuwirth <alexander@neuwirth-informatik.de>
* profiles: mask nptyping revdepsAndrew Ammerlaan2023-10-241-0/+5
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* profiles: mask dev-python/cadquery*Andrew Ammerlaan2023-06-261-0/+7
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* profiles: cleanup old entriesAndrew Ammerlaan2023-05-021-4/+0
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-biology/chiron: treecleanAndrew Ammerlaan2023-04-251-4/+0
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-biology/trans-abyss: treecleanAndrew Ammerlaan2023-04-251-1/+0
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-biology/RSeQC: treeclean, depends on noseAndrew Ammerlaan2023-04-251-4/+0
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-chemistry/rosetta-tools: treecleanAndrew Ammerlaan2023-04-251-4/+0
| | | | | Closes: https://bugs.gentoo.org/902383 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-chemistry/nmrview: treecleanAndrew Ammerlaan2023-04-251-1/+0
| | | | | Bug: https://bugs.gentoo.org/902383 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-chemistry/ligplot+: treecleanAndrew Ammerlaan2023-04-251-1/+0
| | | | | Bug: https://bugs.gentoo.org/902383 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-biology/tmhmm: treecleanAndrew Ammerlaan2023-04-251-1/+0
| | | | | Bug: https://bugs.gentoo.org/902383 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-biology/signalp: treecleanAndrew Ammerlaan2023-04-251-1/+0
| | | | | Bug: https://bugs.gentoo.org/902383 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* dev-lang/pgi: treecleanAndrew Ammerlaan2023-04-251-1/+0
| | | | | Bug: https://bugs.gentoo.org/902383 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* profiles: providing full dependency stackHorea Christian2023-03-291-7/+0
| | | | Signed-off-by: Horea Christian <chr@chymera.eu>
* profiles: providing required dependenciesHorea Christian2023-03-291-1/+0
| | | | Signed-off-by: Horea Christian <chr@chymera.eu>
* profiles: package issues resolvedHorea Christian2023-03-251-2/+0
| | | | Signed-off-by: Horea Christian <chr@chymera.eu>
* profiles: packages issues addressedHorea Christian2023-03-251-1/+0
| | | | Signed-off-by: Horea Christian <chr@chymera.eu>
* profiles: also maks sci-biology/samriAndrew Ammerlaan2023-03-171-0/+2
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* profiles: mask sci-biology/antsAndrew Ammerlaan2023-03-171-0/+6
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* dev-python/matlabengine: add version 9.13.7Andrew Ammerlaan2023-03-031-1/+1
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* profiles: mask packages with missing checksumsAndrew Ammerlaan2023-02-101-0/+9
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* profiles: mask sci-biology/trans-abyssAndrew Ammerlaan2023-02-101-0/+1
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* dev-python/transforms3d: add 0.4.1, remove 0.3.1Andrew Ammerlaan2023-02-101-1/+0
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>