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* sci-libs/linux-gpib: drop 4.3.4Sam James2022-07-102-179/+0
| | | | | Bug: https://bugs.gentoo.org/857141 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/linux-gpib: Stabilize 4.3.4-r1 amd64, #857141Sam James2022-07-101-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/nlopt: x86 stable wrt bug #856550Agostino Sarubbo2022-07-091-1/+1
| | | | | | Package-Manager: Portage-3.0.30, Repoman-3.0.3 RepoMan-Options: --include-arches="x86" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/nlopt: amd64 stable wrt bug #856550Agostino Sarubbo2022-07-091-1/+1
| | | | | | Package-Manager: Portage-3.0.30, Repoman-3.0.3 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/rocFFT: rocm-cmake-5.0.2-r1 which fix doc installYiyang Wu2022-07-091-1/+1
| | | | | | | Closes: https://github.com/gentoo/gentoo/pull/26286 Closes: https://bugs.gentoo.org/836274 Signed-off-by: Yiyang Wu <xgreenlandforwyy@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/rocFFT: add libomp to BDEPEND when using testYiyang Wu2022-07-092-2/+2
| | | | | | | | One src file of test need omp.h header provided by sys-libs/libomp Closes: https://bugs.gentoo.org/836248 Signed-off-by: Yiyang Wu <xgreenlandforwyy@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/rocFFT: Correct BDEPENDYiyang Wu2022-07-092-4/+4
| | | | | | | | | Building rocFFT always needs rocm-cmake. If it's not present, cmake will try to download, causing bug #850937 Closes: https://bugs.gentoo.org/850937 Signed-off-by: Yiyang Wu <xgreenlandforwyy@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/gdal: add 3.5.1Sam James2022-07-092-0/+240
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/rocBLAS: respect MAKEOPTS when build Tensile libsYiyang Wu2022-07-092-2/+77
| | | | | | | | Closes: https://github.com/gentoo/gentoo/pull/26285 Closes: https://bugs.gentoo.org/852236 Suggested-by: Alessandro Barbieri <lssndrbarbieri@gmail.com> Signed-off-by: Yiyang Wu <xgreenlandforwyy@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/ViSP: bump to 3.5.0Alexis Ballier2022-07-072-0/+112
| | | | | Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Alexis Ballier <aballier@gentoo.org>
* sci-libs/octomap: bump to 1.9.8Alexis Ballier2022-07-072-2/+2
| | | | | Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Alexis Ballier <aballier@gentoo.org>
* sci-libs/sundials: amd64 stable wrt bug #856553Agostino Sarubbo2022-07-071-1/+1
| | | | | | Package-Manager: Portage-3.0.30, Repoman-3.0.3 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/dlib: add 19.24Andrew Ammerlaan2022-07-062-0/+102
| | | | | | | Fails to compile with python3_11 at the moment Closes: https://bugs.gentoo.org/846254 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/lmfit: Keyword 9.0-r1 arm64, #856388Arthur Zamarin2022-07-061-2/+2
| | | | Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
* sci-libs/hdf5: add missing ? to REQUIRED_USEAlessandro Barbieri2022-07-051-1/+1
| | | | | | Signed-off-by: Alessandro Barbieri <lssndrbarbieri@gmail.com> Closes: https://github.com/gentoo/gentoo/pull/26233 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/pytorch: add USE flags controlling caffe2Alfredo Tupone2022-07-052-0/+13
| | | | | Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Alfredo Tupone <tupone@gentoo.org>
* sci-libs/pytorch: add 1.12.0James Beddek2022-07-032-0/+57
| | | | | | Signed-off-by: James Beddek <telans@posteo.de> Closes: https://github.com/gentoo/gentoo/pull/26209 Signed-off-by: Alfredo Tupone <tupone@gentoo.org>
* sci-libs/caffe2: add support for cudaJames Beddek2022-07-033-16/+63
| | | | | | | | | | add missing dev-libs/FXdiv dependency use gflags use glog <0.5.0 https://github.com/pytorch/pytorch/issues/58054 add myself as a maintainer Signed-off-by: James Beddek <telans@posteo.de> Signed-off-by: Alfredo Tupone <tupone@gentoo.org>
* sci-libs/caffe2: add 1.12.0James Beddek2022-07-036-36/+371
| | | | | | | | add support fot QNNPACK, dev-python/numpy, opencv, ffmpeg, openmp, opencl add patch to fix install dirs Signed-off-by: James Beddek <telans@posteo.de> Signed-off-by: Alfredo Tupone <tupone@gentoo.org>
* sci-libs/med: add 4.1.1Bernd Waibel2022-07-032-0/+112
| | | | | | | Closes: https://bugs.gentoo.org/853694 Signed-off-by: Bernd Waibel <waebbl-gentoo@posteo.net> Closes: https://github.com/gentoo/gentoo/pull/26047 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/cfitsio: remove smem binaryAlessandro Barbieri2022-07-031-0/+87
| | | | | | | Closes: https://bugs.gentoo.org/855191 Signed-off-by: Alessandro Barbieri <lssndrbarbieri@gmail.com> Closes: https://github.com/gentoo/gentoo/pull/26159 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/cfitsio: conflict with dev-util/smemAlessandro Barbieri2022-07-031-0/+1
| | | | | | Bug: https://bugs.gentoo.org/855191 Signed-off-by: Alessandro Barbieri <lssndrbarbieri@gmail.com> Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/caffe2: add support for nnpackAlfredo Tupone2022-07-023-2/+15
| | | | | Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Alfredo Tupone <tupone@gentoo.org>
* sci-libs/geos: add 3.11.0Sam James2022-07-022-0/+47
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/caffe2: fix configure for xnnpackAlfredo Tupone2022-07-021-2/+2
| | | | | | Closes: https://bugs.gentoo.org/855860 Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Alfredo Tupone <tupone@gentoo.org>
* Move {sci-libs → dev-python}/shapelyMichał Górny2022-07-027-170/+3
| | | | | | | | Shapely is really primarily a Python package, and it seems that the Python team is effectively going to maintain it going forward, so it fits more naturally in dev-python than sci-libs. Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-libs/caffe2: add XNNPACK usageAlfredo Tupone2022-07-023-1/+28
| | | | | Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Alfredo Tupone <tupone@gentoo.org>
* sci-libs/shapely: Add python@ as co-maint.Michał Górny2022-07-021-0/+4
| | | | Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-libs/shapely: Bump to 1.8.2Michał Górny2022-07-023-2/+53
| | | | Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-libs/hdf5: readd unsupported useflagAlessandro Barbieri2022-06-301-3/+7
| | | | | | Signed-off-by: Alessandro Barbieri <lssndrbarbieri@gmail.com> Closes: https://github.com/gentoo/gentoo/pull/26125 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/gdal: depend on newer ogdi w/ .pcSam James2022-06-301-1/+1
| | | | | | | No need for revbump as build-time only issue. Closes: https://bugs.gentoo.org/848015 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/ogdi: install .pc fileSam James2022-06-301-1/+9
| | | | | Closes: https://bugs.gentoo.org/848015 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/libqalculate: keyword 4.2.0 for ~loongWANG Xuerui2022-06-291-1/+1
| | | | Signed-off-by: WANG Xuerui <xen0n@gentoo.org>
* sci-libs/mpir: Stabilize 3.0.0-r1 arm64, #640424matoro2022-06-281-1/+1
| | | | | | | | | | Confirmed that this bug no longer occurs in 3.0.0, builds and passes tests fine. Tested on arm64. Closes: https://bugs.gentoo.org/640424 Signed-off-by: matoro <matoro@users.noreply.github.com> Closes: https://github.com/gentoo/gentoo/pull/26089 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/gdal: x86 stable wrt bug #854369Agostino Sarubbo2022-06-271-1/+1
| | | | | | Package-Manager: Portage-3.0.30, Repoman-3.0.3 RepoMan-Options: --include-arches="x86" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/gdal: ppc64 stable wrt bug #854369Agostino Sarubbo2022-06-271-1/+1
| | | | | | Package-Manager: Portage-3.0.30, Repoman-3.0.3 RepoMan-Options: --include-arches="ppc64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/gdal: ppc stable wrt bug #854369Agostino Sarubbo2022-06-271-1/+1
| | | | | | Package-Manager: Portage-3.0.30, Repoman-3.0.3 RepoMan-Options: --include-arches="ppc" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/caffe2: set python environment on configureAlfredo Tupone2022-06-261-0/+1
| | | | | | Closes: https://bugs.gentoo.org/854468 Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Alfredo Tupone <tupone@gentoo.org>
* sci-libs/gdal: Stabilize 3.5.0-r4 arm64, #854369Arthur Zamarin2022-06-261-1/+1
| | | | Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>
* sci-libs/caffe2: fix depsAlfredo Tupone2022-06-261-0/+1
| | | | | | Closes: https://bugs.gentoo.org/854411 Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Alfredo Tupone <tupone@gentoo.org>
* sci-libs/caffe2: fix depsAlfredo Tupone2022-06-261-0/+1
| | | | | | Closes: https://bugs.gentoo.org/854408 Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Alfredo Tupone <tupone@gentoo.org>
* sci-libs/vtk: Stabilize 9.0.3-r5 amd64, #854369Sam James2022-06-261-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/gdal: Stabilize 3.5.0-r4 amd64, #854369Sam James2022-06-261-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/pytorch: depends on the caffe2 exact versionAlfredo Tupone2022-06-261-1/+1
| | | | | Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Alfredo Tupone <tupone@gentoo.org>
* sci-libs/pytorch: add to treeAlfredo Tupone2022-06-267-0/+146
| | | | | Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Alfredo Tupone <tupone@gentoo.org>
* sci-libs/caffe2: add to treeAlfredo Tupone2022-06-264-0/+201
| | | | | Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Alfredo Tupone <tupone@gentoo.org>
* sci-libs/vtk: add 9.0.3-r5 w/ fixed gdal depSam James2022-06-261-0/+551
| | | | | | | Idea is to stable this w/ new GDAL. See: 7fa499da25bf08098ba57a7421129c9288443de4 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/vtk: fix build against netcdf-4.9.0Bernd Waibel2022-06-262-0/+27
| | | | | | | Closes: https://bugs.gentoo.org/851594 Signed-off-by: Bernd Waibel <waebbl-gentoo@posteo.net> Closes: https://github.com/gentoo/gentoo/pull/25954 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/dealii: build with c++17 support the right way...Matthias Maier2022-06-252-2/+10
| | | | Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/dealii: build with c++17 supportMatthias Maier2022-06-252-0/+2
| | | | Signed-off-by: Matthias Maier <tamiko@gentoo.org>