sci-libs/scikit-image: rename scikits_image + version bump

Signed-off-by: Aisha Tammy <gentoo@aisha.cc>
Signed-off-by: Aaron Bauman <bman@gentoo.org>

4 files changed, 118 insertions, 0 deletions

diff --git a/sci-libs/scikit-image/Manifest b/sci-libs/scikit-image/Manifest
new file mode 100644
index 000000000000..a9303cfafc77
--- /dev/null
+++ b/sci-libs/scikit-image/Manifest
@@ -0,0 +1,2 @@
+DIST scikit-image-0.13.0.tar.gz 26101533 BLAKE2B c28284f64abd58c7bafa8f5f0c781496e8bb28af79c5c730df7cbf2fede958eb88ea420fd7f89e7b8d0d91719a98dd0935af3b2cc50fe501cc8d8d1d0ee56cb9 SHA512 923015e373c406ae2fbbfdf83ce8b91e83790bdf7842c4439fdc9fd58cffe46efc0cfc7a1b0b06e1b2d092a909a6f085335640850883e7608dbccd1074046550
+DIST scikit-image-0.17.2.tar.gz 22682646 BLAKE2B acfa38caff7aa2e1f724e173f544610e643976a40feb752040d2f20d49d871d19dddb34790bf846476932c771c260ad9bd210781439707d7c5f693c9a8fa021c SHA512 3e57d8bea2fd41270eb17e8489c477f58ed98e56cef0192b0b2d455f27f7a2d705161afd61c7bfd556ec938a9a2bf5663ec1aa7b79609a8e5946806356364e82
diff --git a/sci-libs/scikit-image/metadata.xml b/sci-libs/scikit-image/metadata.xml
new file mode 100644
index 000000000000..aa3d4f7f7fb5
--- /dev/null
+++ b/sci-libs/scikit-image/metadata.xml
@@ -0,0 +1,21 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+  <maintainer type="project">
+    <email>sci@gentoo.org</email>
+    <name>Gentoo Science Project</name>
+  </maintainer>
+  <longdescription lang="en">
+    This SciKit (toolkit for SciPy) includes useful image processing
+    algorithms for use with Python and NumPy. While SciPy’s ndimage
+    provides low-level manipulation, scikits.image centres around
+    algorithms and applications.
+  </longdescription>
+  <use>
+    <flag name="freeimage">Enable support for image i/o via<pkg>media-libs/freeimage</pkg></flag>
+    <flag name="pyamg">Enable support for algebraic solvers via <pkg>dev-python/pyamg</pkg></flag>
+  </use>
+  <upstream>
+    <remote-id type="pypi">scikit-image</remote-id>
+  </upstream>
+</pkgmetadata>
diff --git a/sci-libs/scikit-image/scikit-image-0.13.0-r1.ebuild b/sci-libs/scikit-image/scikit-image-0.13.0-r1.ebuild
new file mode 100644
index 000000000000..0db4ea687ed1
--- /dev/null
+++ b/sci-libs/scikit-image/scikit-image-0.13.0-r1.ebuild
@@ -0,0 +1,53 @@
+# Copyright 1999-2020 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+PYTHON_COMPAT=( python3_{6,7} )
+
+inherit distutils-r1 optfeature virtualx
+
+DESCRIPTION="Image processing routines for SciPy"
+HOMEPAGE="https://scikit-image.org/"
+SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
+
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+IUSE="doc freeimage pyamg test"
+RESTRICT="!test? ( test )"
+
+RDEPEND="
+	dev-python/matplotlib[${PYTHON_USEDEP}]
+	dev-python/networkx[${PYTHON_USEDEP}]
+	dev-python/numpy[${PYTHON_USEDEP}]
+	dev-python/pillow[${PYTHON_USEDEP}]
+	dev-python/pywavelets[${PYTHON_USEDEP}]
+	dev-python/six[${PYTHON_USEDEP}]
+	dev-python/scipy[sparse,${PYTHON_USEDEP}]
+	freeimage? ( media-libs/freeimage )
+	pyamg? ( dev-python/pyamg[${PYTHON_USEDEP}] )"
+DEPEND="${RDEPEND}
+	>=dev-python/cython-0.23[${PYTHON_USEDEP}]
+	dev-python/setuptools[${PYTHON_USEDEP}]
+	test? (	dev-python/nose[${PYTHON_USEDEP}] )"
+
+DOCS=( CONTRIBUTORS.txt DEPENDS.txt RELEASE.txt TASKS.txt TODO.txt )
+
+python_test() {
+	distutils_install_for_testing
+	cd "${TEST_DIR}" || die "no ${TEST_DIR} available"
+	echo "backend : Agg" > matplotlibrc || die
+	#echo "backend.qt4 : PyQt4" >> matplotlibrc || die
+	#echo "backend.qt4 : PySide" >> matplotlibrc || die
+	MPLCONFIGDIR=. virtx nosetests --exe -v skimage
+}
+
+pkg_postinst() {
+	optfeature "FITS io capability" dev-python/astropy
+	optfeature "GTK" dev-python/pygtk
+	optfeature "Parallel computation" dev-python/dask
+	# not in portage yet
+	#optfeature "io plugin providing a wide variety of formats, including specialized formats using in medical imaging." dev-python/simpleitk
+	#optfeature "io plugin providing most standard formats" dev-python/imread
+}
diff --git a/sci-libs/scikit-image/scikit-image-0.17.2.ebuild b/sci-libs/scikit-image/scikit-image-0.17.2.ebuild
new file mode 100644
index 000000000000..fe007d997ac2
--- /dev/null
+++ b/sci-libs/scikit-image/scikit-image-0.17.2.ebuild
@@ -0,0 +1,42 @@
+# Copyright 1999-2020 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+# 8,9 not on dev-python/pyamg
+PYTHON_COMPAT=( python3_{6..7} )
+DISTUTILS_USE_SETUPTOOLS=rdepend
+inherit distutils-r1 optfeature
+
+DESCRIPTION="Image processing routines for SciPy"
+HOMEPAGE="https://scikit-image.org/"
+SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
+
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+
+RDEPEND="
+	dev-python/imageio[${PYTHON_USEDEP}]
+	dev-python/matplotlib[${PYTHON_USEDEP}]
+	dev-python/networkx[${PYTHON_USEDEP}]
+	dev-python/numpy[${PYTHON_USEDEP}]
+	dev-python/pillow[${PYTHON_USEDEP}]
+	dev-python/pywavelets[${PYTHON_USEDEP}]
+	dev-python/scipy[sparse,${PYTHON_USEDEP}]
+"
+DEPEND="${RDEPEND}
+	dev-python/cython[${PYTHON_USEDEP}]
+	dev-python/setuptools[${PYTHON_USEDEP}]
+"
+
+DOCS=( CONTRIBUTORS.txt RELEASE.txt )
+
+pkg_postinst() {
+	optfeature "FITS io capability" dev-python/astropy
+	optfeature "GTK" dev-python/pygtk
+	optfeature "Parallel computation" dev-python/dask
+	optfeature "io plugin providing most standard formats" dev-python/imread
+	# not in portage yet
+	#optfeature "io plugin providing a wide variety of formats, including specialized formats using in medical imaging." dev-python/simpleitk
+}