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authorRobin H. Johnson <robbat2@gentoo.org>2015-08-08 13:49:04 -0700
committerRobin H. Johnson <robbat2@gentoo.org>2015-08-08 17:38:18 -0700
commit56bd759df1d0c750a065b8c845e93d5dfa6b549d (patch)
tree3f91093cdb475e565ae857f1c5a7fd339e2d781e /sci-chemistry/pdbcns
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proj/gentoo: Initial commit
This commit represents a new era for Gentoo: Storing the gentoo-x86 tree in Git, as converted from CVS. This commit is the start of the NEW history. Any historical data is intended to be grafted onto this point. Creation process: 1. Take final CVS checkout snapshot 2. Remove ALL ChangeLog* files 3. Transform all Manifests to thin 4. Remove empty Manifests 5. Convert all stale $Header$/$Id$ CVS keywords to non-expanded Git $Id$ 5.1. Do not touch files with -kb/-ko keyword flags. Signed-off-by: Robin H. Johnson <robbat2@gentoo.org> X-Thanks: Alec Warner <antarus@gentoo.org> - did the GSoC 2006 migration tests X-Thanks: Robin H. Johnson <robbat2@gentoo.org> - infra guy, herding this project X-Thanks: Nguyen Thai Ngoc Duy <pclouds@gentoo.org> - Former Gentoo developer, wrote Git features for the migration X-Thanks: Brian Harring <ferringb@gentoo.org> - wrote much python to improve cvs2svn X-Thanks: Rich Freeman <rich0@gentoo.org> - validation scripts X-Thanks: Patrick Lauer <patrick@gentoo.org> - Gentoo dev, running new 2014 work in migration X-Thanks: Michał Górny <mgorny@gentoo.org> - scripts, QA, nagging X-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed
Diffstat (limited to 'sci-chemistry/pdbcns')
-rw-r--r--sci-chemistry/pdbcns/Manifest1
-rw-r--r--sci-chemistry/pdbcns/metadata.xml8
-rw-r--r--sci-chemistry/pdbcns/pdbcns-2.0.010504.ebuild26
3 files changed, 35 insertions, 0 deletions
diff --git a/sci-chemistry/pdbcns/Manifest b/sci-chemistry/pdbcns/Manifest
new file mode 100644
index 000000000000..f6f839594082
--- /dev/null
+++ b/sci-chemistry/pdbcns/Manifest
@@ -0,0 +1 @@
+DIST pdbcns.2.0.010504.perl.tgz 6806 RMD160 9398bb4e766b45365827663e8cf72eee63ec42a7 SHA1 61f9a8655b2d6d2df6709d8b5bc853de0498fe4f SHA256 a2c66e44e036b6a1ff2eff90b59c4adf20edb70d3f704bd7bc7f356040d8f98a
diff --git a/sci-chemistry/pdbcns/metadata.xml b/sci-chemistry/pdbcns/metadata.xml
new file mode 100644
index 000000000000..1837bbc07a6e
--- /dev/null
+++ b/sci-chemistry/pdbcns/metadata.xml
@@ -0,0 +1,8 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+ <herd>sci-chemistry</herd>
+ <maintainer>
+ <email>jlec@gentoo.org</email>
+ </maintainer>
+</pkgmetadata>
diff --git a/sci-chemistry/pdbcns/pdbcns-2.0.010504.ebuild b/sci-chemistry/pdbcns/pdbcns-2.0.010504.ebuild
new file mode 100644
index 000000000000..94b8c6138845
--- /dev/null
+++ b/sci-chemistry/pdbcns/pdbcns-2.0.010504.ebuild
@@ -0,0 +1,26 @@
+# Copyright 1999-2012 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=4
+
+DESCRIPTION="Convert atom names for common amino acids and nucleic acid bases from PDB format to CNS or back"
+HOMEPAGE="http://www.mybiosoftware.com/3d-molecular-model/314/"
+#SRC_URI="http://kinemage.biochem.duke.edu/php/downlode.php?filename=/downloads/software/scripts/${PN}.${PV}.perl.tgz"
+SRC_URI="http://dev.gentoo.org/~jlec/distfiles/${PN}.${PV}.perl.tgz"
+
+SLOT="0"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+LICENSE="BSD"
+IUSE=""
+
+DEPEND=""
+RDEPEND="${DEPEND}
+ dev-lang/perl"
+
+S="${WORKDIR}"/${PN}
+
+src_install() {
+ newbin ${PN}*.pl ${PN}
+ dohtml *html
+}