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| author |   Eli Schwartz <eschwartz93@gmail.com> | 2024-03-07 20:20:48 -0500 |
|---|---|---|
| committer |   Sam James <sam@gentoo.org> | 2024-03-08 11:09:00 +0000 |
| commit | 490ada295187ec9b28e867128b53f6bdf5f68f63 (patch) | |
| tree | 7740cb8bacb12fb25ae6db846d0792793befe2b2 /sci-biology | |
| parent | sci-biology/abyss: remove useless sed (diff) | |
| download | gentoo-490ada295187ec9b28e867128b53f6bdf5f68f63.tar.gz gentoo-490ada295187ec9b28e867128b53f6bdf5f68f63.tar.bz2 gentoo-490ada295187ec9b28e867128b53f6bdf5f68f63.zip | |
sci-biology/abyss: mark as LTO-unsafe
Closes: https://bugs.gentoo.org/862252
Signed-off-by: Eli Schwartz <eschwartz93@gmail.com>
Signed-off-by: Sam James <sam@gentoo.org>
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/abyss/abyss-2.3.4.ebuild | 7 |
1 files changed, 6 insertions, 1 deletions
diff --git a/sci-biology/abyss/abyss-2.3.4.ebuild b/sci-biology/abyss/abyss-2.3.4.ebuild index 437975eb357a..2c2c14d35bd5 100644 --- a/sci-biology/abyss/abyss-2.3.4.ebuild +++ b/sci-biology/abyss/abyss-2.3.4.ebuild @@ -3,7 +3,7 @@ EAPI=8 -inherit autotools toolchain-funcs +inherit autotools flag-o-matic toolchain-funcs DESCRIPTION="Assembly By Short Sequences - a de novo, parallel, paired-end sequence assembler" HOMEPAGE="https://www.bcgsc.ca/resources/software/abyss/" @@ -48,6 +48,11 @@ src_prepare() { } src_configure() { + # -Werror=lto-type-mismatch + # https://bugs.gentoo.org/862252 + # https://github.com/bcgsc/abyss/issues/474 + filter-lto + # disable building haskell tool Misc/samtobreak # unless request by user: bug #534412 use misc-haskell || export ac_cv_prog_ac_ct_GHC= |