diff options
| author |   Justin Lecher <jlec@gentoo.org> | 2018-03-10 16:48:03 +0000 |
|---|---|---|
| committer | Justin Lecher <jlec@gentoo.org> | 2018-03-11 21:27:37 +0000 |
| commit | 18baf890ca547e8d885b8a9c4567d9858a7954d9 (patch) | |
| tree | 50d69f8a5315694c54e36584a6dbfcdc45cbab8c /sci-biology/rebase | |
| parent | dev-util/rustfmt: bump to newer version (diff) | |
| download | gentoo-18baf890ca547e8d885b8a9c4567d9858a7954d9.tar.gz gentoo-18baf890ca547e8d885b8a9c4567d9858a7954d9.tar.bz2 gentoo-18baf890ca547e8d885b8a9c4567d9858a7954d9.zip | |
sci-biology/rebase: Bump to latest release
Package-Manager: Portage-2.3.20, Repoman-2.3.6
Signed-off-by: Justin Lecher <jlec@gentoo.org>
Diffstat (limited to 'sci-biology/rebase')
| -rw-r--r-- | sci-biology/rebase/Manifest | 1 | ||||
| -rw-r--r-- | sci-biology/rebase/rebase-1803.ebuild | 45 |
2 files changed, 46 insertions, 0 deletions
diff --git a/sci-biology/rebase/Manifest b/sci-biology/rebase/Manifest index 1925b3f4b3e8..e27e133eac6e 100644 --- a/sci-biology/rebase/Manifest +++ b/sci-biology/rebase/Manifest @@ -2,3 +2,4 @@ DIST rebase-1701.tar.xz 120604368 BLAKE2B 1160f494b4e8650fb8ab9144756642377322a2 DIST rebase-1702.tar.xz 117583312 BLAKE2B 19089d5767c35da22fb95bac7bc030ef593b159dda04d512b053a84c1cb4947679c8304bcbcb9388256e92cb0056d16b1b2035efac6eae84831d6fa95bd41a2a SHA512 3bba0738840b966a0a58123f265de1951428c599f3af9c581e1becec17ba3a93233a231de0673dbb2dc0bb82d54096e0eed43846967bf232f412bb785ce3b23f DIST rebase-1703.tar.xz 122252304 BLAKE2B 26afca990e300a5c471f55b1a168b1930212a347b70dd3224a51894bb701540a27a0384bd250caee8e0d0dd4886c6664ab74b20bcfb71fd42d1c73ebf2ce6be6 SHA512 838bf5e09073ff8520403d955a8195298def1d792d1fd3044e7c8896c6202a0340c1e96dbe80e85c5801cd3be3ed63f19488101cca02d46cdf5f1d0521ede796 DIST rebase-1704.tar.xz 124351900 BLAKE2B bdbda714cc07f744b56c83b80a1b0f0a724a990b200c615458852910f282761aaf37a312a388ec7fee94a62ead47e01ddca8b205f2ad05d780a299e7547206f7 SHA512 0e4019d41ccbae86b8cb1f6dfa4c34d3fccbe084a330f04f2fdb774186e35c761655e1619d9a90d444ea3bab0910df1b60cf9a249ee31d66a254d28dd6b32cc7 +DIST rebase-1803.tar.xz 152581448 BLAKE2B 7907f0aee9e202f062f5ec4b5e4a112cd0fb3900b3d65dc57ffe4832c5aac088f50c2661f1b9c1bb8b57e7b4f6d453bec2899b460383d06b4e679da13e92aad2 SHA512 ab718e87c33c975bc6a93d3c6be130c9751612b744dc5451bcfde5c10d3d9d68ed4a4d921fff1f48063bfa2e9f3c8a016d4e5e0afa4eb7e4131511767608534b diff --git a/sci-biology/rebase/rebase-1803.ebuild b/sci-biology/rebase/rebase-1803.ebuild new file mode 100644 index 000000000000..e9944bde30fb --- /dev/null +++ b/sci-biology/rebase/rebase-1803.ebuild @@ -0,0 +1,45 @@ +# Copyright 1999-2018 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 + +EAPI=6 + +MY_PV=${PV#1} + +DESCRIPTION="A restriction enzyme database" +HOMEPAGE="http://rebase.neb.com" +SRC_URI="https://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz" + +SLOT="0" +LICENSE="public-domain" +KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris" +IUSE="emboss minimal" + +RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )" +DEPEND="${RDEPEND}" + +RESTRICT="binchecks strip" + +src_compile() { + if use emboss; then + echo; einfo "Indexing Rebase for usage with EMBOSS." + mkdir REBASE || die + EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \ + -protofile proto.${MY_PV} -equivalences \ + || die "Indexing Rebase failed." + echo + fi +} + +src_install() { + if ! use minimal; then + insinto /usr/share/${PN} + doins withrefm.${MY_PV} proto.${MY_PV} + fi + newdoc REBASE.DOC README + if use emboss; then + insinto /usr/share/EMBOSS/data/REBASE + doins REBASE/embossre.{enz,ref,sup} + insinto /usr/share/EMBOSS/data + doins REBASE/embossre.equ + fi +} |