Moved to EAPI=3 for PREFIX support, imported prefix patches from overlay, keyworded as in overlay

Package-Manager: portage-2.2_rc65/cvs/Linux x86_64

6 files changed, 429 insertions, 4 deletions

diff --git a/sci-libs/gdal/ChangeLog b/sci-libs/gdal/ChangeLog
index 5c31775db40d..9d8e097c4b66 100644
--- a/sci-libs/gdal/ChangeLog
+++ b/sci-libs/gdal/ChangeLog
@@ -1,6 +1,12 @@
 # ChangeLog for sci-libs/gdal
 # Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-libs/gdal/ChangeLog,v 1.73 2010/02/23 05:29:53 nerdboy Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-libs/gdal/ChangeLog,v 1.74 2010/03/07 19:32:30 jlec Exp $
+
+*gdal-1.6.3-r1 (07 Mar 2010)
+
+  07 Mar 2010; Justin Lecher (jlec) <jlec@gentoo.org> +gdal-1.6.3-r1.ebuild:
+  Moved to EAPI=3 for PREFIX support, imported prefix patches from overlay,
+  keyworded as in overlay
 
   23 Feb 2010; Steve Arnold <nerdboy@gentoo.org> gdal-1.6.1.ebuild,
   gdal-1.6.2.ebuild, gdal-1.6.3.ebuild:
diff --git a/sci-libs/gdal/gdal-1.6.3-r1.ebuild b/sci-libs/gdal/gdal-1.6.3-r1.ebuild
new file mode 100644
index 000000000000..8efe7bfb834f
--- /dev/null
+++ b/sci-libs/gdal/gdal-1.6.3-r1.ebuild
@@ -0,0 +1,220 @@
+# Copyright 1999-2010 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-libs/gdal/gdal-1.6.3-r1.ebuild,v 1.1 2010/03/07 19:32:30 jlec Exp $
+
+EAPI="3"
+WANT_AUTOCONF="2.5"
+RUBY_OPTIONAL="yes"
+USE_RUBY="ruby18"
+
+inherit autotools distutils eutils perl-module ruby toolchain-funcs
+
+DESCRIPTION="GDAL is a translator library for raster geospatial data formats (includes OGR support)"
+HOMEPAGE="http://www.gdal.org/"
+SRC_URI="http://download.osgeo.org/gdal/${P}.tar.gz"
+
+SLOT="0"
+LICENSE="MIT"
+KEYWORDS="~amd64 ~ppc ~ppc64 ~sparc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~x86-macos"
+# need to get these arches updated on several libs first
+#KEYWORDS="~alpha ~hppa"
+
+IUSE="curl debug doc ecwj2k fits geos gif gml hdf hdf5 jpeg jpeg2k mysql \
+netcdf odbc png ogdi perl postgres python ruby sqlite threads"
+
+RDEPEND=">=sys-libs/zlib-1.1.4
+	>=media-libs/tiff-3.9.1
+	sci-libs/libgeotiff
+	dev-libs/expat
+	curl? ( net-misc/curl )
+	jpeg? ( media-libs/jpeg )
+	gif? ( media-libs/giflib )
+	png? ( media-libs/libpng )
+	perl? ( dev-lang/perl )
+	python? ( virtual/python
+		dev-python/numpy )
+	ruby? ( >=dev-lang/ruby-1.8.4.20060226 )
+	fits? ( sci-libs/cfitsio )
+	ogdi? ( sci-libs/ogdi )
+	gml? ( >=dev-libs/xerces-c-3 )
+	hdf5? ( >=sci-libs/hdf5-1.6.4 )
+	postgres? ( virtual/postgresql-base )
+	|| (
+	    netcdf? ( sci-libs/netcdf )
+	    hdf? ( sci-libs/hdf )
+	)
+	|| (
+	    jpeg2k? ( media-libs/jasper )
+	    ecwj2k? ( sci-libs/libecwj2 )
+	)
+	mysql? ( virtual/mysql )
+	odbc?   ( dev-db/unixODBC )
+	geos?   ( >=sci-libs/geos-2.2.1 )
+	sqlite? ( >=dev-db/sqlite-3 )"
+
+DEPEND="${RDEPEND}
+	perl? ( >=dev-lang/swig-1.3.32 )
+	python? ( >=dev-lang/swig-1.3.32 )
+	ruby? ( >=dev-lang/swig-1.3.32 )
+	doc? ( app-doc/doxygen )"
+
+AT_M4DIR="${S}/m4"
+
+pkg_setup() {
+	if [ -n "${GDAL_CONFIGURE_OPTS}" ]; then
+	    elog "User-specified configure options are ${GDAL_CONFIGURE_OPTS}."
+	else
+	    elog "User-specified configure options are not set."
+	    elog "If needed, set GDAL_CONFIGURE_OPTS to enable grass support."
+	fi
+}
+
+src_prepare() {
+	eaclocal
+	eautoconf
+
+	epatch "${FILESDIR}"/${PN}-1.4.2-datadir.patch \
+	    "${FILESDIR}"/${PN}-1.5.0-soname.patch \
+	    "${FILESDIR}"/${PN}-1.5.1-python-install.patch \
+	    "${FILESDIR}"/${PN}-1.6.0-swig-fix.patch \
+	    "${FILESDIR}"/${PN}-1.6.1-ruby-make.patch
+
+	if useq hdf && useq netcdf; then
+		ewarn "Netcdf and HDF4 are incompatible due to certain tools in"
+		ewarn "common; HDF5 is now the preferred choice for HDF data."
+		die "Please disable either the hdf or netcdf use flag."
+	fi
+}
+
+src_configure() {
+
+	distutils_python_version
+
+	local pkg_conf="${GDAL_CONFIGURE_OPTS}"
+	local use_conf=""
+
+	pkg_conf="${pkg_conf} --enable-shared=yes --with-pic \
+		--with-libgrass=no --without-libtool --with-expat=${EPREFIX}/usr"
+
+	use_conf="$(use_with jpeg) $(use_with png) $(use_with mysql) \
+	    $(use_with postgres pg) $(use_with python) $(use_with ruby) \
+	    $(use_with threads) $(use_with fits cfitsio) $(use_with perl) \
+	    $(use_with netcdf) $(use_with hdf hdf4) $(use_with geos) \
+	    $(use_with sqlite sqlite3 ="${EPREFIX}"/usr) $(use_with jpeg2k jasper) $(use_with odbc) \
+	    $(use_with gml xerces) $(use_with hdf5) $(use_with curl) \
+	    $(use_enable debug)"
+
+	# It can't find this
+	if useq ogdi ; then
+	    use_conf="--with-ogdi=${EPREFIX}/usr/$(get_libdir) ${use_conf}"
+	fi
+
+	if useq mysql ; then
+	    use_conf="--with-mysql=${EPREFIX}/usr/bin/mysql_config ${use_conf}"
+	fi
+
+	if useq gif ; then
+	    use_conf="--with-gif=internal ${use_conf}"
+	else
+	    use_conf="--with-gif=no ${use_conf}"
+	fi
+
+	if useq python ; then
+	    use_conf="--with-pymoddir=${EPREFIX}/usr/$(get_libdir)/python${PYVER}/site-packages \
+		${use_conf}"
+	fi
+
+	# Fix doc path just in case
+	sed -i -e "s:@exec_prefix@/doc:@exec_prefix@/share/doc/${PF}/html:g" \
+	    GDALmake.opt.in || die "sed gdalmake.opt failed"
+
+	econf ${pkg_conf} ${use_conf} || die "econf failed"
+}
+
+src_compile() {
+	local i
+	for i in perl ruby python; do
+		if useq $i; then
+			rm "${S}"/swig/$i/*_wrap.cpp
+			emake -C "${S}"/swig/$i generate || \
+				die "make generate failed for swig/$i"
+		fi
+	done
+
+	# parallel makes fail on the ogr stuff (C++, what can I say?)
+	# also failing with gcc4 in libcsf
+	emake -j1 || die "emake failed"
+
+	if useq python; then
+	    sed -i -e "s#library_dirs = #library_dirs = ${EPREFIX}/usr/$(get_libdir):#g" \
+		swig/python/setup.cfg || die "sed python setup.cfg failed"
+	    sed -i -e "s:\$(DESTDIR)\$(prefix):\$(DESTDIR)\$(INST_PREFIX):g" \
+		swig/python/GNUmakefile || die "sed python makefile failed"
+	fi
+
+	if useq perl ; then
+	    cd "${S}"/swig/perl
+	    perl-module_src_prep
+	    perl-module_src_compile
+	    cd "${S}"
+	fi
+
+	if useq doc ; then
+	    make docs || die "make docs failed"
+	fi
+}
+
+src_install() {
+
+	if useq perl ; then
+	    cd "${S}"/swig/perl
+	    perl-module_src_install
+	    sed -i -e "s:BINDINGS        =       python ruby perl:BINDINGS        =       python ruby:g" \
+		GDALmake.opt
+	    cd "${S}"
+	fi
+
+	# einstall causes sandbox violations on /usr/lib/libgdal.so
+	emake DESTDIR="${D}" install \
+	    || die "make install failed"
+
+	dodoc Doxyfile HOWTO-RELEASE NEWS
+
+	if useq doc ; then
+	    dohtml html/* || die "install html failed"
+	    docinto ogr
+	    dohtml ogr/html/* || die "install ogr html failed"
+	fi
+
+	if useq python; then
+	    newdoc swig/python/README.txt README-python.txt
+	    dodir /usr/share/${PN}/samples
+	    insinto /usr/share/${PN}/samples
+	    doins swig/python/samples/*
+	fi
+
+	use perl && fixlocalpod
+}
+
+pkg_postinst() {
+	elog
+	elog "If you need libgrass support, then you must rebuild gdal, after"
+	elog "installing the latest Grass, and set the following option:"
+	elog
+	elog "GDAL_CONFIGURE_OPTS=--with-grass=\$GRASS_HOME emerge gdal"
+	elog
+	elog "GDAL is most useful with full graphics support enabled via various"
+	elog "USE flags: png, jpeg, gif, jpeg2k, etc. Also python, fits, ogdi,"
+	elog "geos, and support for either netcdf or HDF4 is available, as well as"
+	elog "grass, and mysql, sqlite, or postgres (grass support requires grass 6"
+	elog "and rebuilding gdal).  HDF5 support is now included."
+	elog
+	elog "Note: tiff and geotiff are now hard depends, so no USE flags."
+	elog "Also, this package will check for netcdf before hdf, so if you"
+	elog "prefer hdf, please emerge hdf with USE=szip prior to emerging"
+	elog "gdal.  Detailed API docs require doxygen (man pages are free)."
+	elog
+	elog "Check available image and data formats after building with"
+	elog "gdalinfo and ogrinfo (using the --formats switch)."
+	elog
+}
diff --git a/sci-libs/gsl/ChangeLog b/sci-libs/gsl/ChangeLog
index ceea6dc9525f..845c129f2f13 100644
--- a/sci-libs/gsl/ChangeLog
+++ b/sci-libs/gsl/ChangeLog
@@ -1,6 +1,12 @@
 # ChangeLog for sci-libs/gsl
 # Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-libs/gsl/ChangeLog,v 1.65 2010/01/30 19:07:33 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-libs/gsl/ChangeLog,v 1.66 2010/03/07 19:26:09 jlec Exp $
+
+*gsl-1.13-r2 (07 Mar 2010)
+
+  07 Mar 2010; Justin Lecher (jlec) <jlec@gentoo.org> +gsl-1.13-r2.ebuild:
+  Moved to EAPI=3 for PREFIX support, imported prefix patches from overlay,
+  keyworded as in overlay
 
   30 Jan 2010; Raúl Porcel <armin76@gentoo.org> gsl-1.13-r1.ebuild:
   alpha/arm/ia64/s390/sh/sparc stable wrt #299826
diff --git a/sci-libs/gsl/gsl-1.13-r2.ebuild b/sci-libs/gsl/gsl-1.13-r2.ebuild
new file mode 100644
index 000000000000..a679d0007a6f
--- /dev/null
+++ b/sci-libs/gsl/gsl-1.13-r2.ebuild
@@ -0,0 +1,88 @@
+# Copyright 1999-2010 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-libs/gsl/gsl-1.13-r2.ebuild,v 1.1 2010/03/07 19:26:09 jlec Exp $
+
+EAPI="3"
+
+inherit eutils flag-o-matic autotools
+
+DESCRIPTION="The GNU Scientific Library"
+HOMEPAGE="http://www.gnu.org/software/gsl/"
+SRC_URI="mirror://gnu/${PN}/${P}.tar.gz"
+
+LICENSE="GPL-3"
+SLOT="0"
+KEYWORDS="~alpha ~amd64 ~arm ~hppa ~ia64 ~mips ~ppc ~ppc64 ~s390 ~sh ~sparc ~x86 ~x86-fbsd ~x86-interix ~amd64-linux ~x86-linux ~ppc-macos ~x86-macos ~sparc-solaris ~x86-solaris"
+IUSE="cblas"
+
+RDEPEND="cblas? ( virtual/cblas )"
+DEPEND="${RDEPEND}
+	app-admin/eselect-cblas
+	dev-util/pkgconfig"
+
+pkg_setup() {
+	ESELECT_PROF="gsl"
+	# prevent to use external cblas from a previously installed gsl
+	local current_lib=$(eselect cblas show | cut -d' ' -f2)
+	if use cblas && [[ ${current_lib} == gsl ]]; then
+		ewarn "USE flag cblas is set: linking gsl with an external cblas."
+		ewarn "However the current selected external cblas is gsl."
+		ewarn "Please install and/or eselect another cblas"
+		die "Circular gsl dependency"
+	fi
+}
+
+src_prepare() {
+	filter-flags -ffast-math
+	epatch "${FILESDIR}"/${P}-cblas.patch
+	epatch "${FILESDIR}"/${P}-cblas-vars.patch
+	eautoreconf
+
+	cp "${FILESDIR}"/eselect.cblas.gsl "${T}"/
+	sed -i -e "s:/usr:${EPREFIX}/usr:" "${T}"/eselect.cblas.gsl || die
+	if [[ ${CHOST} == *-darwin* ]] ; then
+		sed -i -e 's/\.so\([\.0-9]\+\)\?/\1.dylib/g' \
+			"${T}"/eselect.cblas.gsl || die
+	fi
+}
+
+src_configure() {
+	if use cblas; then
+		export CBLAS_LIBS="$(pkg-config --libs cblas)"
+		export CBLAS_CFLAGS="$(pkg-config --cflags cblas)"
+	fi
+	econf $(use_with cblas)
+}
+
+src_install() {
+	emake install DESTDIR="${D}" || die "emake install failed."
+	dodoc AUTHORS BUGS ChangeLog NEWS README THANKS TODO
+
+	# take care of pkgconfig file for cblas implementation.
+	sed -e "s/@LIBDIR@/$(get_libdir)/" \
+		-e "s/@PV@/${PV}/" \
+		-e "/^prefix=/s:=:=${EPREFIX}:" \
+		-e "/^libdir=/s:=:=${EPREFIX}:" \
+		"${FILESDIR}"/cblas.pc.in > cblas.pc \
+		|| die "sed cblas.pc failed"
+	insinto /usr/$(get_libdir)/blas/gsl
+	doins cblas.pc || die "installing cblas.pc failed"
+	eselect cblas add $(get_libdir) "${T}"/eselect.cblas.gsl \
+		${ESELECT_PROF}
+}
+
+pkg_postinst() {
+	local p=cblas
+	local current_lib=$(eselect ${p} show | cut -d' ' -f2)
+	if [[ ${current_lib} == ${ESELECT_PROF} || -z ${current_lib} ]]; then
+		# work around eselect bug #189942
+		local configfile="${EROOT}"/etc/env.d/${p}/$(get_libdir)/config
+		[[ -e ${configfile} ]] && rm -f ${configfile}
+		eselect ${p} set ${ESELECT_PROF}
+		elog "${p} has been eselected to ${ESELECT_PROF}"
+	else
+		elog "Current eselected ${p} is ${current_lib}"
+		elog "To use ${p} ${ESELECT_PROF} implementation, you have to issue (as root):"
+		elog "\t eselect ${p} set ${ESELECT_PROF}"
+	fi
+}
diff --git a/sci-libs/lapack-reference/ChangeLog b/sci-libs/lapack-reference/ChangeLog
index bc1c68072414..37c7f61cd1b8 100644
--- a/sci-libs/lapack-reference/ChangeLog
+++ b/sci-libs/lapack-reference/ChangeLog
@@ -1,6 +1,13 @@
 # ChangeLog for sci-libs/lapack-reference
-# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-libs/lapack-reference/ChangeLog,v 1.49 2009/12/12 17:43:05 markusle Exp $
+# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-libs/lapack-reference/ChangeLog,v 1.50 2010/03/07 19:31:08 jlec Exp $
+
+*lapack-reference-3.2.1-r1 (07 Mar 2010)
+
+  07 Mar 2010; Justin Lecher (jlec) <jlec@gentoo.org>
+  +lapack-reference-3.2.1-r1.ebuild:
+  Moved to EAPI=3 for PREFIX support, imported prefix patches from overlay,
+  keyworded as in overlay
 
   12 Dec 2009; Markus Dittrich <markusle@gentoo.org>
   lapack-reference-3.2.1.ebuild,
diff --git a/sci-libs/lapack-reference/lapack-reference-3.2.1-r1.ebuild b/sci-libs/lapack-reference/lapack-reference-3.2.1-r1.ebuild
new file mode 100644
index 000000000000..3bb1ac8cae26
--- /dev/null
+++ b/sci-libs/lapack-reference/lapack-reference-3.2.1-r1.ebuild
@@ -0,0 +1,98 @@
+# Copyright 1999-2010 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-libs/lapack-reference/lapack-reference-3.2.1-r1.ebuild,v 1.1 2010/03/07 19:31:08 jlec Exp $
+
+EAPI="3"
+
+inherit eutils autotools flag-o-matic fortran multilib
+
+MyPN="${PN/-reference/}"
+PATCH_V="3.2.1"
+
+DESCRIPTION="FORTRAN reference implementation of LAPACK Linear Algebra PACKage"
+HOMEPAGE="http://www.netlib.org/lapack/index.html"
+SRC_URI="mirror://gentoo/${MyPN}-${PV}.tgz
+	mirror://gentoo/${PN}-${PATCH_V}-autotools.patch.bz2"
+
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS="~alpha ~amd64 ~hppa ~ia64 ~ppc ~ppc64 ~s390 ~sparc ~x86 ~x86-fbsd ~x86-freebsd ~amd64-linux ~ia64-linux ~x86-linux ~ppc-macos"
+IUSE="doc"
+
+DEPEND="virtual/blas
+	dev-util/pkgconfig
+	app-admin/eselect-lapack"
+RDEPEND="virtual/blas
+	app-admin/eselect-lapack
+	doc? ( app-doc/lapack-docs )"
+
+S="${WORKDIR}/${MyPN}-${PV}"
+
+pkg_setup() {
+	FORTRAN="g77 gfortran ifc"
+	fortran_pkg_setup
+	if  [[ ${FORTRANC} == if* ]]; then
+		ewarn "Using Intel Fortran at your own risk"
+		export LDFLAGS="$(raw-ldflags)"
+		export NOOPT_FFLAGS=-O
+	fi
+	ESELECT_PROF=reference
+}
+
+src_prepare() {
+	epatch "${WORKDIR}"/${PN}-${PATCH_V}-autotools.patch
+	epatch "${FILESDIR}"/${P}-parallel-make.patch
+	eautoreconf
+
+	# set up the testing routines
+	sed -e "s:g77:${FORTRANC}:" \
+		-e "s:-funroll-all-loops -O3:${FFLAGS} $(pkg-config --cflags blas):" \
+		-e "s:LOADOPTS =:LOADOPTS = ${LDFLAGS} $(pkg-config --cflags blas):" \
+		-e "s:../../blas\$(PLAT).a:$(pkg-config --libs blas):" \
+		-e "s:lapack\$(PLAT).a:SRC/.libs/liblapack.a:" \
+		make.inc.example > make.inc \
+		|| die "Failed to set up make.inc"
+
+	cp "${FILESDIR}"/eselect.lapack.reference "${T}"/
+	sed -i -e "s:/usr:${EPREFIX}/usr:" "${T}"/eselect.lapack.reference || die
+	if [[ ${CHOST} == *-darwin* ]] ; then
+		sed -i -e 's/\.so\([\.0-9]\+\)\?/\1.dylib/g' \
+			"${T}"/eselect.lapack.reference || die
+	fi
+}
+
+src_configure() {
+	econf \
+		--libdir="${EPREFIX}/usr/$(get_libdir)/lapack/reference" \
+		--with-blas="$(pkg-config --libs blas)" \
+		|| die "econf failed"
+}
+
+src_install() {
+	emake DESTDIR="${D}" install || die "emake install failed"
+	dodoc README || die "dodoc failed"
+	eselect lapack add $(get_libdir) "${T}"/eselect.lapack.reference ${ESELECT_PROF}
+}
+
+src_test() {
+	cd "${S}"/TESTING/MATGEN
+	emake || die "Failed to create tmglib.a"
+	cd "${S}"/TESTING
+	emake || die "lapack-reference tests failed."
+}
+
+pkg_postinst() {
+	local p=lapack
+	local current_lib=$(eselect ${p} show | cut -d' ' -f2)
+	if [[ ${current_lib} == ${ESELECT_PROF} || -z ${current_lib} ]]; then
+		# work around eselect bug #189942
+		local configfile="${EROOT}"/etc/env.d/${p}/$(get_libdir)/config
+		[[ -e ${configfile} ]] && rm -f ${configfile}
+		eselect ${p} set ${ESELECT_PROF}
+		elog "${p} has been eselected to ${ESELECT_PROF}"
+	else
+		elog "Current eselected ${p} is ${current_lib}"
+		elog "To use ${p} ${ESELECT_PROF} implementation, you have to issue (as root):"
+		elog "\t eselect ${p} set ${ESELECT_PROF}"
+	fi
+}