summaryrefslogtreecommitdiff
diff options
context:
space:
mode:
authorJustin Lecher <jlec@gentoo.org>2012-09-06 09:16:48 +0000
committerJustin Lecher <jlec@gentoo.org>2012-09-06 09:16:48 +0000
commit0fe46f29a047623608474ef62a7fd0e7dca93de3 (patch)
tree9b02d2e73032a98532befa37ae460394a74e4434 /sci-chemistry
parentImprove respect for *FLAGS. Fixes part of bug #427782. (diff)
downloadhistorical-0fe46f29a047623608474ef62a7fd0e7dca93de3.tar.gz
historical-0fe46f29a047623608474ef62a7fd0e7dca93de3.tar.bz2
historical-0fe46f29a047623608474ef62a7fd0e7dca93de3.zip
sci-chemistry/mars: Version Bump
Package-Manager: portage-2.2.0_alpha124/cvs/Linux x86_64
Diffstat (limited to 'sci-chemistry')
-rw-r--r--sci-chemistry/mars/ChangeLog7
-rw-r--r--sci-chemistry/mars/Manifest10
-rw-r--r--sci-chemistry/mars/mars-1.2.ebuild42
3 files changed, 54 insertions, 5 deletions
diff --git a/sci-chemistry/mars/ChangeLog b/sci-chemistry/mars/ChangeLog
index 8a4049b505f3..5519b69aa196 100644
--- a/sci-chemistry/mars/ChangeLog
+++ b/sci-chemistry/mars/ChangeLog
@@ -1,6 +1,11 @@
# ChangeLog for sci-chemistry/mars
# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/mars/ChangeLog,v 1.5 2012/07/24 13:11:09 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/mars/ChangeLog,v 1.6 2012/09/06 09:16:48 jlec Exp $
+
+*mars-1.2 (06 Sep 2012)
+
+ 06 Sep 2012; Justin Lecher <jlec@gentoo.org> +mars-1.2.ebuild:
+ Version Bump
24 Jul 2012; Justin Lecher <jlec@gentoo.org> mars-1.1.3.ebuild, metadata.xml:
Use QA_PREBUILT for binary packages
diff --git a/sci-chemistry/mars/Manifest b/sci-chemistry/mars/Manifest
index f70b633bdc3f..a264e4771ab3 100644
--- a/sci-chemistry/mars/Manifest
+++ b/sci-chemistry/mars/Manifest
@@ -2,14 +2,16 @@
Hash: SHA256
DIST mars-1.1.3_linux.tar.Z 2682055 SHA256 728182f1204ec7a8a16e781c6bc0a8dc1346f8b92af24905c58a1fb0a7aa7acb SHA512 4dbfaac13283b62bd77ee95dc0d850e7c6dfcb542abe5e00f4c0e6ea57eb03b1faec41a9c603b3a6872d4dc07ae835d065139f916ee24c970f05d4dcd34f80f4 WHIRLPOOL e9a2afac25584a72a4af57b8f7306cbcecb1f7840f63117e0118a8afc83e18b481556aa3d941b4ad18788993b9140f6b65ff592f33587e901563b5228be1a024
+DIST mars-1.2_linux.tar.gz 2058733 SHA256 c909aa781296d806f89c8d51d89b7345c3e94dd33fc8cc72554573a78ff21b2b SHA512 ba7ec4e94cf5918d22405022c75feabf3e5b345d96075eabf50eb24857101575bb41d15e5686822c2b2f25ba554aa7d7a2b65122dd47304939234a4a884ae4d2 WHIRLPOOL 3cbc59474d776cc79d3c392ae55ce6effe13ae088ff544afd3537daf157adc2c14e1074a38b937e197c87d262f37371dc7109d31f758d25c4c210847a5fb6a79
EBUILD mars-1.1.3.ebuild 1039 SHA256 8b8263aa846df7de03496390227c42fc1ceb82f66a8a00cd1cb35c0e25194c2a SHA512 e2420628ac6393b4caa41fb94aa247980cfdb7c19184ef39f1b94709eb6cc37654cbbad0ed9ed15aa9c8c30ea69689d7ff241d82ee1f936ab510392f9df1a82e WHIRLPOOL 496ee4c17763de1108fd6fd3b2347a97a0509f89ae2724da9a0e21070215816a6cd0f7a662d7d2a1ed0f4e58386d703b03ae2901b9057936d5e9fc5137f22ea2
-MISC ChangeLog 711 SHA256 1b35609c7bcee521c1780bec3ec6348b456039de9687ddcc38af2dede739cec5 SHA512 649e973e1bd81ece3c8bb886b4dfeec31d00f23efd5fa0f76285c30c47ee28f5b8c6d508fe615982cc0d669cf94921513bfea6a5c94f3b085871068629a8d4f1 WHIRLPOOL cddac1fc54d28121e2c79a8375d07cdad5d09c68f1564ff9ae64b9c3dbe7d5a55bfdf4e8fe2b73f3f15339d7e44abba9a1f2c08c94f9af95e91e9eba293b0800
+EBUILD mars-1.2.ebuild 981 SHA256 5adfab6c6b7f89747b1fea725c468d9cf78256f242476e792c20dfb9e6d5ba90 SHA512 cbe7eb47a4967339cd6eedadc49cc7a53bcb4afbdfaf90a521625328d23ce2bb3d6d6edc3281f0e386d7045f1aadf533340e3181d951ed9a9a3034f73ad03794 WHIRLPOOL 402aadcf701c2c3d76b7ed80f609a7ffcaad656aa750e87c21fe6f28b23bb8d149411e98112d891b178f7112d67b8555e0f680c4ba8d86ab68a15258607e4bdc
+MISC ChangeLog 817 SHA256 1a9d2d74c27ef26654b7b3e194e2fb5218f988e11dbcedfee8979f4ab61c3338 SHA512 65d5f2d3b9dfedc2c6b91cfef1bb650b0e1809e7fad73ed1d617d15dc92e1f8bbc1bec01cf28d215b03946b0bda99a44e2425248f006f636dff9bd954360541b WHIRLPOOL 393c301108b81942b8a43969cce2f1a1ea2cdacdef0dde3defd0f6ba6dcf45bfefba7f0f1cae35a028a54f793df614212a3b717678da7083830415392658180d
MISC metadata.xml 219 SHA256 0be94b46df4c9a73494034f33b1371769951f52890e5c857ebe1dc9bc729d0a8 SHA512 8e1fa48bb6533db28b30f09f61673779d75cebd0ba8058abb411cb62595788272998bb9d3e1be8a0f6f95ca42722efc6af7e4d5741e15fe72df4ad8c872383c1 WHIRLPOOL 12f73f93602d45fe69385989b4e8e91507665e0d7deb148365fce2c41d9a85e9bcaaa940ce039a554770f4f4b2207e33a2cea5ad784561b3c3a92be8584f4478
-----BEGIN PGP SIGNATURE-----
Version: GnuPG v2.0.19 (GNU/Linux)
Comment: GPGTools - http://gpgtools.org
-iEYEAREIAAYFAlAOnvIACgkQgAnW8HDreRaB8QCgglkjEhSzGDop9U6mOQddzzHt
-mJIAnjcF9R4VUGo3AtPPzoLRGFTLigr0
-=ovq2
+iEYEAREIAAYFAlBIagUACgkQgAnW8HDreRZtwgCgh1fM8gZmRG4YtNXQwMkSq27j
+FRUAoLINz0MSK04aWRC5/x9ku80nsduN
+=rWHa
-----END PGP SIGNATURE-----
diff --git a/sci-chemistry/mars/mars-1.2.ebuild b/sci-chemistry/mars/mars-1.2.ebuild
new file mode 100644
index 000000000000..f9d2f4fc19b9
--- /dev/null
+++ b/sci-chemistry/mars/mars-1.2.ebuild
@@ -0,0 +1,42 @@
+# Copyright 1999-2012 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/mars/mars-1.2.ebuild,v 1.1 2012/09/06 09:16:48 jlec Exp $
+
+EAPI=4
+
+MY_P="${P}_linux"
+
+DESCRIPTION="Robust automatic backbone assignment of proteins"
+HOMEPAGE="http://www.mpibpc.mpg.de/groups/zweckstetter/_links/software_mars.htm"
+SRC_URI="http://www.mpibpc.mpg.de/groups/zweckstetter/_software_files/_${PN}/${MY_P}.tar.gz"
+
+SLOT="0"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+LICENSE="as-is"
+IUSE="examples"
+
+RDEPEND="sci-biology/psipred"
+DEPEND=""
+
+S="${WORKDIR}"/${MY_P}
+
+QA_PREBUILT="opt/mars/*"
+
+src_install() {
+ dobin bin/runmars*
+
+ exeinto /opt/${PN}/
+ doexe bin/{${PN},calcJC-S2,runmars*,*.awk} *.awk
+ insinto /opt/${PN}/
+ doins bin/*.{tab,txt}
+ if use examples; then
+ insinto /usr/share/${PN}/
+ doins -r examples
+ fi
+
+ cat >> "${T}"/23mars <<- EOF
+ MARSHOME="${EPREFIX}/opt/${PN}"
+ EOF
+
+ doenvd "${T}"/23mars
+}