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authorJeffrey Gardner <je_fro@gentoo.org>2008-06-03 18:45:14 +0000
committerJeffrey Gardner <je_fro@gentoo.org>2008-06-03 18:45:14 +0000
commit016e473fefec247b2cf7b1ea9b138f036b2777ad (patch)
tree46c5a1205d3a68b113cdda609836d4f622bdc46f /sci-chemistry
parentSign Manfiest (diff)
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No altivec patching with this gromacs version. Thanks to Maik Nijhuis in bug #224773.
Package-Manager: portage-2.1.5.3
Diffstat (limited to 'sci-chemistry')
-rw-r--r--sci-chemistry/gromacs/ChangeLog8
-rw-r--r--sci-chemistry/gromacs/Manifest6
-rw-r--r--sci-chemistry/gromacs/gromacs-3.2.1-r1.ebuild12
-rw-r--r--sci-chemistry/gromacs/gromacs-3.3.1-r1.ebuild19
4 files changed, 22 insertions, 23 deletions
diff --git a/sci-chemistry/gromacs/ChangeLog b/sci-chemistry/gromacs/ChangeLog
index 64e695a58e71..d2acc91e00d7 100644
--- a/sci-chemistry/gromacs/ChangeLog
+++ b/sci-chemistry/gromacs/ChangeLog
@@ -1,6 +1,10 @@
# ChangeLog for sci-chemistry/gromacs
-# Copyright 2002-2007 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/gromacs/ChangeLog,v 1.23 2007/06/13 18:15:51 armin76 Exp $
+# Copyright 2002-2008 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/gromacs/ChangeLog,v 1.24 2008/06/03 18:45:14 je_fro Exp $
+
+ 03 Jun 2008; Jeff Gardner <je_fro@gentoo.org> gromacs-3.3.1-r1.ebuild:
+ No altivec patching with this gromacs version. Thanks to Maik Nijhuis in
+ bug #224773.
13 Jun 2007; Raúl Porcel <armin76@gentoo.org> gromacs-3.3.1-r1.ebuild:
Modify the ebuild so it compiles on alpha and mark stable wrt #168182
diff --git a/sci-chemistry/gromacs/Manifest b/sci-chemistry/gromacs/Manifest
index fce8f09f1224..4cece126e3fc 100644
--- a/sci-chemistry/gromacs/Manifest
+++ b/sci-chemistry/gromacs/Manifest
@@ -2,7 +2,7 @@ AUX gromacs-alpha-axp_asm.patch 613 RMD160 56a617d34b9aa96f71cb84124271107d56557
AUX gromacs-ppc64-altivec.patch 571 RMD160 e6bdccd29a29fb9ee85f0ca4a15f2ea229b6f52a SHA1 fe059c262d4fdbc9b918769dc88dd8a2ed177b6b SHA256 1e60a3a12cfd706af1860ca2ff36074291540f8ffa3616636eb612037f0611c3
DIST gromacs-3.2.1.tar.gz 3302723 RMD160 778fb44b4b113eb5ba6e758884276165a8f003e9 SHA1 ddc86120c578e1147daf6e2f849da2096d75469b SHA256 de85710553202e17a3ac67049d2cf51117939d3d8944a34aa0909aa3771bef53
DIST gromacs-3.3.1.tar.gz 7992897 RMD160 48e6f9098ac4f5b834f4beb050846c60aea18fff SHA1 8c67ee772cadf93067b3c8bcec65d7b3520df1dc SHA256 3df40151ff5364fab1c4d8692ec247d8245437e954882a803178cbe6b812d81f
-EBUILD gromacs-3.2.1-r1.ebuild 1975 RMD160 ff5dfc572d27eda698c76845a88f58422bfabccc SHA1 c0b27b9543c669cb59d65a0c6cf4d4994c51acef SHA256 b5b43f7f1d032e64f95b1247530404556db7a57e623c9ceaf4384f2c7f65b0ef
-EBUILD gromacs-3.3.1-r1.ebuild 5722 RMD160 524f2f24e4eb6efa414d529dd3c33447c083ecab SHA1 9938e5617c11805d5cb5cf33b4dd6544a7cf41c5 SHA256 37eb917256f87220f1bbee7048b4ce5744c0e4407408206dabe1e2077580fb08
-MISC ChangeLog 6117 RMD160 9ded9e4bd39b6edd8fb67c94527d4b8fa1f6d4c1 SHA1 48d4e62de6d2cdc13dcc318fe958fc73a4cad669 SHA256 ec45c0840ee7014f57e4e83694159f2b5f16805e95d747ae5d53e74187483c92
+EBUILD gromacs-3.2.1-r1.ebuild 1972 RMD160 1295aab9e62ea7bbecc861197c10750be72c9d95 SHA1 af03cfe77b60bffc741e22a741c8f6e1ffb91470 SHA256 97ce18a986ed699d7cb1413041f6274a6e9dab0207f2fdea670b114717acc5ab
+EBUILD gromacs-3.3.1-r1.ebuild 5643 RMD160 46053984dd8b131fc55f090d333328de9128cf99 SHA1 2c5f2f10916a849567d60a9a707f7afdbe037ebc SHA256 9dcb75433abe378c92bdda4106c66590f66c351c5ffd5255e9e0f55204744359
+MISC ChangeLog 6280 RMD160 29c965c3e288a769fc309b93c9c924f8db3465a8 SHA1 77567cfadcc2daf83ad7f4a8ba2f1e7fd60c0dfa SHA256 cc78708897b09edb60c3fef67af47c61803d5d3738c920b2268830e9e34f43ed
MISC metadata.xml 166 RMD160 4452298fd03e7c9395d1182bfe69d60a14144af6 SHA1 cb0b513473c0348f4f6f6cd9a132e4884155fddb SHA256 84c92b49702daf95eace8d2765215cbd8650da4ef776f9f700b5ce3785dec852
diff --git a/sci-chemistry/gromacs/gromacs-3.2.1-r1.ebuild b/sci-chemistry/gromacs/gromacs-3.2.1-r1.ebuild
index 08b1c0b34b18..0d7ee123e392 100644
--- a/sci-chemistry/gromacs/gromacs-3.2.1-r1.ebuild
+++ b/sci-chemistry/gromacs/gromacs-3.2.1-r1.ebuild
@@ -1,6 +1,6 @@
-# Copyright 1999-2006 Gentoo Foundation
+# Copyright 1999-2008 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/gromacs/gromacs-3.2.1-r1.ebuild,v 1.4 2006/06/25 00:28:25 spyderous Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/gromacs/gromacs-3.2.1-r1.ebuild,v 1.5 2008/06/03 18:45:14 je_fro Exp $
inherit eutils
@@ -25,7 +25,7 @@ DEPEND="=sci-libs/fftw-2.1*
src_unpack() {
unpack ${A}
if use ppc64 && use altivec ; then
- epatch ${FILESDIR}/${PN}-ppc64-altivec.patch
+ epatch "${FILESDIR}"/${PN}-ppc64-altivec.patch
fi
}
@@ -56,12 +56,12 @@ src_compile() {
}
src_install () {
- make DESTDIR=${D} install || die
+ make DESTDIR="${D}" install || die
# Install documentation.
- dodoc AUTHORS COPYING INSTALL README
+ dodoc AUTHORS INSTALL README
#move html docs under /usr/share/doc
#and leave examples and templates under /usr/gromacs...
- mv ${D}/usr/share/${P}/html ${D}/usr/share/doc/${PF}
+ mv "${D}"/usr/share/${P}/html "${D}"/usr/share/doc/${PF}
}
diff --git a/sci-chemistry/gromacs/gromacs-3.3.1-r1.ebuild b/sci-chemistry/gromacs/gromacs-3.3.1-r1.ebuild
index 00317b415b17..89dbb8c16a55 100644
--- a/sci-chemistry/gromacs/gromacs-3.3.1-r1.ebuild
+++ b/sci-chemistry/gromacs/gromacs-3.3.1-r1.ebuild
@@ -1,6 +1,6 @@
-# Copyright 1999-2007 Gentoo Foundation
+# Copyright 1999-2008 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/gromacs/gromacs-3.3.1-r1.ebuild,v 1.9 2007/06/13 18:15:51 armin76 Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/gromacs/gromacs-3.3.1-r1.ebuild,v 1.10 2008/06/03 18:45:14 je_fro Exp $
inherit eutils fortran multilib
@@ -32,12 +32,7 @@ DEPEND=">=sci-libs/fftw-3.0.1
src_unpack() {
unpack ${A}
- if use ppc64 && use altivec ; then
- epatch "${FILESDIR}"/${PN}-ppc64-altivec.patch
- fi
-
cd "${S}"
-
# Fix typos in a couple of files.
sed -e "s:_nb_kerne010_x86_64_sse2:_nb_kernel010_x86_64_sse2:" \
-i src/gmxlib/nonbonded/nb_kernel_x86_64_sse2/nb_kernel010_x86_64_sse2.intel_syntax.s \
@@ -184,22 +179,22 @@ src_compile() {
}
src_install () {
- cd ${WORKDIR}/${P}-single ;
- emake DESTDIR=${D} install || die "installing single failed"
+ cd "${WORKDIR}"/${P}-single ;
+ emake DESTDIR="${D}" install || die "installing single failed"
if use mpi ; then
cd "${WORKDIR}"/${P}-single-mpi
- emake DESTDIR=${D} install-mdrun \
+ emake DESTDIR="${D}" install-mdrun \
|| die "installing mdrun_mpi failed"
fi
if use double-precision ; then
- cd ${WORKDIR}/${P}-double && emake DESTDIR=${D} install \
+ cd "${WORKDIR}"/${P}-double && emake DESTDIR="${D}" install \
|| die "installing double failed"
if use mpi ; then
cd "${WORKDIR}"/${P}-double-mpi
- emake DESTDIR=${D} install-mdrun \
+ emake DESTDIR="${D}" install-mdrun \
|| die "installing mdrun_mpi_d failed"
fi