stable x86, bug 270580

Package-Manager: portage-2.1.6.11/cvs/Linux i686
RepoMan-Options: --force

7 files changed, 67 insertions, 13 deletions

diff --git a/sci-biology/bioperl-db/ChangeLog b/sci-biology/bioperl-db/ChangeLog
index b76fc0df7830..9e5d194cc340 100644
--- a/sci-biology/bioperl-db/ChangeLog
+++ b/sci-biology/bioperl-db/ChangeLog
@@ -1,6 +1,10 @@
 # ChangeLog for sci-biology/bioperl-db
 # Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-db/ChangeLog,v 1.2 2009/05/13 15:51:12 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-db/ChangeLog,v 1.3 2009/06/02 18:24:16 fauli Exp $
+
+  02 Jun 2009; Christian Faulhammer <fauli@gentoo.org>
+  bioperl-db-1.6.0.ebuild:
+  stable x86, bug 270580
 
   13 May 2009; Andrey Kislyuk <weaver@gentoo.org> bioperl-db-1.6.0.ebuild,
   bioperl-db-9999.ebuild:
diff --git a/sci-biology/bioperl-db/Manifest b/sci-biology/bioperl-db/Manifest
index 1d4b5a6da666..ed2434ccb855 100644
--- a/sci-biology/bioperl-db/Manifest
+++ b/sci-biology/bioperl-db/Manifest
@@ -1,5 +1,15 @@
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA1
+
 DIST BioPerl-db-1.6.0.tar.bz2 296041 RMD160 6cae2b39b4e46b30f7f378e22ca565fb9f9cfbeb SHA1 7bbfe5ef163dca332531372dd728161e89bd7bb8 SHA256 81710b9c6d021511b8ad19d106309f76ef3111015873a56af9b109902d24a699
-EBUILD bioperl-db-1.6.0.ebuild 936 RMD160 61772d2801378a7169740d575c3b096d728ebcf6 SHA1 a8605948a629a7c5959d073afb1182c9c9dad591 SHA256 f9be4ca7c40f53a3be70405312fe9f72a9e8e394ff3208031c8826f94fb7806f
+EBUILD bioperl-db-1.6.0.ebuild 934 RMD160 4bc3509ff430d2f30bcf7d2b71196c86400a44d3 SHA1 3f02e43be1b18ccad9835a6d6ae0a51dcdb1da10 SHA256 1bf19a5c233691ce15fbdec5da702a910d49ffb53ce22e46b5d52a0ac3219e95
 EBUILD bioperl-db-9999.ebuild 947 RMD160 13fb5183c0387c5cca0056928239e122242d443d SHA1 ef1dc28f4ce50e83cdbedbb7b2ef5fd094bccf90 SHA256 acc6b9db340796d3971b924ef03dac369968c19dc322981083bff0eff17e5915
-MISC ChangeLog 623 RMD160 699182797061515ccb4e5554ab53234aadc8174d SHA1 8e58beb7c3c632c211a9d0d18aacbb194fb0b1f3 SHA256 ce0c134e34680e901d334e4adcab02021faf837b720dc79fb62e0e620bba4672
+MISC ChangeLog 730 RMD160 11e5a5729ce3391c3b678cb4e6ff55b9d6850ef7 SHA1 84f44e68a9e49ff0f0adab512214f5959709977b SHA256 ea7ac2488f0dce4aab3ed425a8b2fad803ba4b3f8be080b8ebd1971cee0226e7
 MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110
+-----BEGIN PGP SIGNATURE-----
+Version: GnuPG v2.0.11 (GNU/Linux)
+
+iEYEARECAAYFAkolbloACgkQNQqtfCuFneOI9wCffHda9JsbxpX+jhyHKPmsaSzg
+vHIAnjW8hZcToxIi/mXLmzwIFtGfqivh
+=AcCc
+-----END PGP SIGNATURE-----
diff --git a/sci-biology/bioperl-db/bioperl-db-1.6.0.ebuild b/sci-biology/bioperl-db/bioperl-db-1.6.0.ebuild
index a69b96e784e4..cfe20660eed2 100644
--- a/sci-biology/bioperl-db/bioperl-db-1.6.0.ebuild
+++ b/sci-biology/bioperl-db/bioperl-db-1.6.0.ebuild
@@ -1,6 +1,6 @@
 # Copyright 1999-2009 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-db/bioperl-db-1.6.0.ebuild,v 1.2 2009/05/13 15:51:12 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-db/bioperl-db-1.6.0.ebuild,v 1.3 2009/06/02 18:24:16 fauli Exp $
 
 EAPI="2"
 
@@ -12,7 +12,7 @@ SRC_URI="http://bioperl.org/DIST/BioPerl-db-${PV}.tar.bz2"
 
 LICENSE="Artistic GPL-2"
 SLOT="0"
-KEYWORDS="~amd64 ~x86"
+KEYWORDS="~amd64 x86"
 IUSE=""
 
 CDEPEND=">=sci-biology/bioperl-${PV}
diff --git a/sci-biology/bioperl-network/Manifest b/sci-biology/bioperl-network/Manifest
index 07c4cf0a5931..dabcfd9f3753 100644
--- a/sci-biology/bioperl-network/Manifest
+++ b/sci-biology/bioperl-network/Manifest
@@ -1,5 +1,15 @@
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA1
+
 DIST BioPerl-network-1.6.0.tar.bz2 902029 RMD160 d7152d5917849c40527c56ff07c956fd3c292a1d SHA1 5d5da9f329a97a47939038f6be91f6628c25213c SHA256 1f9e48d7bf1b563fef235eede9524f8446a0374b65c6bf522f3203ed61164cb3
-EBUILD bioperl-network-1.6.0.ebuild 782 RMD160 1e6ef8479be3b0112f00e8f345b9ad404231703f SHA1 ef279c8dd55f18662c7a7c9f87b5581b7ed40b19 SHA256 0d8d5ca2371c7f31cc5a514286ece34851f0243ff27b278555b80f68875d9f07
+EBUILD bioperl-network-1.6.0.ebuild 780 RMD160 662d71d7340730d4e3915cab3c4a502c06bfe36b SHA1 0ec326995dabd79fda94a5f73d67db27d889644f SHA256 fb71687496a1b85f7ecf9483753f56738bd737db4d2caf1b0c3c3bb990c974bb
 EBUILD bioperl-network-9999.ebuild 788 RMD160 017116a6da46bc6e4a08f90497d6d40577ec6c86 SHA1 6221ba00cd8de834a30e08a22233831a46669220 SHA256 3f9dee6251949af80894da99da084a2e33d1ab72d7c2e87c5df7e77cf7dec4f8
-MISC ChangeLog 663 RMD160 f15009378ee5f93d95dfe4c723a216cb8c574d74 SHA1 e71924e1d591fa0e8a6e96e09a478e8dcd0545f9 SHA256 f00d8a437905e296adde34083347db9cc701df5c2a29c160c42147e11b02baf7
+MISC ChangeLog 775 RMD160 112bcba19dc31ec856708af88de5dc828b5ba536 SHA1 670d9966492cb88ecf99b4ead1e1ef5ac9f11a73 SHA256 008c9de8207db22b3360ea3be43099e53b0bbb9d460ce9c816614cc8ca0fc84e
 MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110
+-----BEGIN PGP SIGNATURE-----
+Version: GnuPG v2.0.11 (GNU/Linux)
+
+iEYEARECAAYFAkolbpwACgkQNQqtfCuFneMTMgCggKe6rm3w4wMzuvSr3rrnG5uX
+b6IAn0ArBq7A8So8eNkyNRILFFiQQx03
+=Uqnk
+-----END PGP SIGNATURE-----
diff --git a/sci-biology/bioperl-run/Manifest b/sci-biology/bioperl-run/Manifest
index b17bdc9496ad..1e615b93d528 100644
--- a/sci-biology/bioperl-run/Manifest
+++ b/sci-biology/bioperl-run/Manifest
@@ -1,10 +1,20 @@
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA1
+
 AUX bioperl-run-Pise-test-patch.diff 722 RMD160 85c3744bfc14db91971e4df2dfd967c5ad9f0310 SHA1 0498546ae9f12d0db5194c41a360910833870eac SHA256 84c8280f8d3af311b53c8b6edd4e6ffa9acc0824528d96d7f1c2537404d3e30f
 DIST BioPerl-run-1.6.1.tar.bz2 3968370 RMD160 16654d46d3b5c42c984165ef3e0de93a3b01b015 SHA1 9577201381c34290a34a74aac1f3c35df28f0938 SHA256 16f406d196b6e6d063f4ef518161571ea27909c5b47184d9eddf1eb9da147f53
 DIST bioperl-run-1.4.tar.gz 830774 RMD160 264f9826e4d92c3cac96937b73db9bcc96b9eea8 SHA1 578434800872a41631d1bf2b632f3ef0475a24a1 SHA256 54eea327c8f80061d6c45e56b64d5c51daa20b723390eed1a3377f3a61645d86
 DIST bioperl-run-1.5.1.tar.gz 864369 RMD160 841e33cffda7b787b1700a075bf985c717d7e678 SHA1 35d4ab009f7e653dd18bb636854181d68841b613 SHA256 d9e1f5bdff5541376cab1c8b7e8db9bedbbb7b6f76b965d55dc20122a98f93e8
 EBUILD bioperl-run-1.4.ebuild 1273 RMD160 c96f8714c1a4a4386706f4296572e7e8240e2989 SHA1 142de2a107e8a5020b46973c816ac69e176b2f9f SHA256 17cffd41ea3b90f8f7f4ea71b56b7c04e4f7f2a8a756e1c725d864c4dece2539
 EBUILD bioperl-run-1.5.1.ebuild 1288 RMD160 c3b8b7a28ef8ca2884e77ad5c125fb12a34db0be SHA1 97d54cb97995e08bd02deeafd8dd9c093b461a2b SHA256 d5b066528a330c5a88f1f4c9925185a7efbe7605d27b3ca7dc46e00046943aea
-EBUILD bioperl-run-1.6.1.ebuild 1107 RMD160 fab621c13641e1ac705cadf9d8338b59f80103b4 SHA1 55bb155be7476aeed478c4ff12f88ace684c2eb4 SHA256 bdd0ce674cb9a29376883b93d09e82126a05979b560f6b19c83f47aafc1e24d3
+EBUILD bioperl-run-1.6.1.ebuild 1105 RMD160 82c3564634c40a4948fb0e4c5b755a89b9707fd5 SHA1 be5568e178ced94eb08c8771ef83b0146236d66c SHA256 cf6031a761621fd58d8d0769f6eb49a371125f6c8b948e85c6f73d72a9557887
 EBUILD bioperl-run-9999.ebuild 1096 RMD160 f4e0ae6ac4a3019936d3d8573ea72819cf2c9c1a SHA1 f7759d5c96f1b6c84941a88d2249f9105858a3b8 SHA256 2bbd1d9fc4098e5a44c5ccac12d4b41a2593258f72c005b5ec567c0d8c58f4c7
-MISC ChangeLog 3341 RMD160 3f2a1aad2105caa670a96d809e804f36efae74d4 SHA1 2f5e22947982dae7178afbc23e2ffb121ff8392e SHA256 a50691e1416cd3ea22ac2de9cc953cd94d71530919c1af53947ad006a0082f4c
+MISC ChangeLog 3449 RMD160 6794dc9942dc7579b73eec5d78ab7b6cc5bb7d2c SHA1 0cd92a67cf4dfb11f5130eb525f00e18faaaaee0 SHA256 44f827f3694a85cb952cddbbbdf477a47e517c3f0ca8ad87d141ad7962ba6eda
 MISC metadata.xml 165 RMD160 b247a16b6552b292d1249ff4e8ea5060ad2c4372 SHA1 a9f91a3a303f4c85430e21eca09913e1c9426366 SHA256 560c375768c8e164d954d61924f110da785b4771012cb830963eaa267a319132
+-----BEGIN PGP SIGNATURE-----
+Version: GnuPG v2.0.11 (GNU/Linux)
+
+iEYEARECAAYFAkolbn0ACgkQNQqtfCuFneNpMwCfZgY7g30qaCSh2ewA/ZIRZzcJ
+RewAnRYGPllb89dq9wXQ0QbHVu7AIvOE
+=Alnc
+-----END PGP SIGNATURE-----
diff --git a/sci-biology/bioperl/Manifest b/sci-biology/bioperl/Manifest
index e7fc25fc7c5f..1f6067717c57 100644
--- a/sci-biology/bioperl/Manifest
+++ b/sci-biology/bioperl/Manifest
@@ -1,9 +1,19 @@
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA1
+
 DIST BioPerl-1.6.0.tar.bz2 5640786 RMD160 89261afbbc3754a1dd78934b7b8b653593aa3427 SHA1 7b442ddcb02233c4cb9963a2ea883f755f6904bb SHA256 50a35b1b2552c8f54c83f2bbba7b36264e94443374b86b389208437c8cae3bf6
 DIST bioperl-1.4.tar.bz2 4224508 RMD160 657170cc17655f2ab9ed5f6509cac5ae7eedd2c3 SHA1 d0683ff46ef304c04a40296561065d78baa0d787 SHA256 5ba68ce688ac4f079057e03b5bfca60f410d9eb68961d03b62ae75050718687b
 DIST bioperl-1.5.1.tar.bz2 5538613 RMD160 422bdd0dc17dd246ec1fc3ae6fe020705111892d SHA1 9841a458fd928eb9715f14eb686c7b1af3a379e7 SHA256 696c8bd162bc79fa3c75eeb63bb42f8cbcbb4b72de4dcb3bec7ea7a293506f6c
 EBUILD bioperl-1.4.ebuild 1144 RMD160 7e3108360f973a5199cfe5d89471980fdf475813 SHA1 da03c6457bb8feefd939ec532c0292a31eeb3c57 SHA256 1f9f7fba2480c392b99e860af10910a881e39af8123540bc8e7e6ccf206cf741
 EBUILD bioperl-1.5.1-r1.ebuild 1191 RMD160 1ad0bd41869118ce4482427e7de56829f7fe22ce SHA1 c50b157d571897c896b678d6456f0f7bbed3b60b SHA256 bdee9659d5d464c2339678c1854bac42cf83e900d20380d6c4c3f1ff1606d504
-EBUILD bioperl-1.6.0-r2.ebuild 1815 RMD160 8c28a7e897054e5f22ed5379c140f500322781a5 SHA1 3f7b8ef582b5f2f66a2fea2fe2b028ffcb9ca79a SHA256 fa288c2e7c3f496ebd27711e32968b5b1305927e0393d70d6fb30634e0aaa0c2
+EBUILD bioperl-1.6.0-r2.ebuild 1813 RMD160 6224cec893797784034797703f80e2d029690244 SHA1 29f39a1fe697884f1d531ba66703eff485728bbd SHA256 79e348819cd78154550c84cf8679cb280a85ef66d250559fe3d89cca16107cb8
 EBUILD bioperl-9999.ebuild 1925 RMD160 6ffb12ae413f8dc0f3f9716020dd95b4340c8238 SHA1 011dfca2b235eb7570721e744a86ad167552b57c SHA256 8622dc20d5b1793599196ced5dcf5869aea7b3bd90407b5d44ec9553ce2d642c
-MISC ChangeLog 7701 RMD160 282be14bc25acf373d46af9984aed1eb7e242e94 SHA1 afd43b1b270013f087f5f44c2ea8d3a7c9f6b3d8 SHA256 64708a55935b116671d02f1c0a8cca846325cc315be9a5d912e6633047afccbe
+MISC ChangeLog 7808 RMD160 6affac076ccdc411aaf4d9917579e9c8ad3c62ea SHA1 9e9aeeb12fe91b153c098992150ad890c9122148 SHA256 6bcba6bf4896ef31505f48abd41e45ed3b5eb48781bf0583e59a4d63e4a815a5
 MISC metadata.xml 357 RMD160 3cd4b6e41d2a1d5ec431a90e0c59ef887f1d5706 SHA1 5a81dea20ab58342851c77d5fd7a2835053ac03b SHA256 be157b353d49731ed3ade95f20205bf367b65ff762d336042e26bca078609afa
+-----BEGIN PGP SIGNATURE-----
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+=hdXa
+-----END PGP SIGNATURE-----
diff --git a/sci-biology/biosql/Manifest b/sci-biology/biosql/Manifest
index b2bfe9504782..7b928a2de92e 100644
--- a/sci-biology/biosql/Manifest
+++ b/sci-biology/biosql/Manifest
@@ -1,4 +1,14 @@
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA1
+
 DIST biosql-1.0.1.tar.bz2 253516 RMD160 bc10a7b2271902320fb7fce54cf4204737b333ef SHA1 676dc417f6588edaa2298d73ab1dcd7f877a5477 SHA256 3604ceaf6f3e42a11613b49577b7c68f04d9e094cca4e5d932359c815fc9ad01
-EBUILD biosql-1.0.1.ebuild 935 RMD160 0d450322439b9926fc5e56ce74209c5d874bc155 SHA1 abf12208c7fa1c3b322590aa7edb91bb528f9828 SHA256 34ce3123d652f39d171442bd9d11ec66ce1615c20da291058bf8d1e58d48bc0f
-MISC ChangeLog 581 RMD160 3fd47cff564329ca4c0a5d07ab22dbc89e23897f SHA1 d58fcc436266cc9470bab754e62f528acfc4f6e2 SHA256 e28f6dbe20a563e3ed3e95aa19a4ff9809a87580640b198ecf424a647db326f3
+EBUILD biosql-1.0.1.ebuild 932 RMD160 9f3a578810c378ff3ce91f01ed39b07b3b2e3c9f SHA1 7decf7c4f18f73dd346c21fffc55c03a4354fdaf SHA256 66a51a7f8a44ef3aecf5c0a41aff90c8679f34281ffbd681cb9311eefe91ce26
+MISC ChangeLog 681 RMD160 1d52d8fa456c4efb70f5777d08c52beef9d9c1fa SHA1 391d5d540adabf1e04afc9492deb27c215409996 SHA256 4769623a78c2ce482c64ed7ea3376d730bda5b697c69fe71b0603801d00198bc
 MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110
+-----BEGIN PGP SIGNATURE-----
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+-----END PGP SIGNATURE-----