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authorBrent Baude <ranger@gentoo.org>2005-08-08 23:39:13 +0000
committerBrent Baude <ranger@gentoo.org>2005-08-08 23:39:13 +0000
commit06d8cb5c1dba5cd67495a7707f2ee4547ecbbc40 (patch)
treead8ef094f5b5e538904972bc0725ccc2076f5699 /sci-biology
parentVersion bump, bug #101777 (diff)
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Adding patch for ppc64 to change from xlc compiler to gcc in the makefile. was already ~ppc64
Package-Manager: portage-2.0.51.22-r2
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/ncbi-tools/ChangeLog7
-rw-r--r--sci-biology/ncbi-tools/Manifest5
-rw-r--r--sci-biology/ncbi-tools/files/ncbi-tools-20050605-lop.patch.gzbin0 -> 398 bytes
-rw-r--r--sci-biology/ncbi-tools/ncbi-tools-20050605.ebuild6
4 files changed, 13 insertions, 5 deletions
diff --git a/sci-biology/ncbi-tools/ChangeLog b/sci-biology/ncbi-tools/ChangeLog
index 1efc37b0e10a..2a478e5b18a7 100644
--- a/sci-biology/ncbi-tools/ChangeLog
+++ b/sci-biology/ncbi-tools/ChangeLog
@@ -1,6 +1,11 @@
# ChangeLog for sci-biology/ncbi-tools
# Copyright 2000-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools/ChangeLog,v 1.18 2005/08/08 22:52:46 ranger Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools/ChangeLog,v 1.19 2005/08/08 23:39:13 ranger Exp $
+
+ 08 Aug 2005; Brent Baude <ranger@gentoo.org>
+ +files/ncbi-tools-20050605-lop.patch.gz, ncbi-tools-20050605.ebuild:
+ Added patch for 20050506 which when ppc64, will patch the makefile to use
+ gcc instead of the default xlc (IBM compiler) which doesnt exist on gentoo.
08 Aug 2005; Brent Baude <ranger@gentoo.org> ncbi-tools-20050429.ebuild:
ncbi-tools-20050429.ebuild does not compile on ppc64; will fix later ebuild
diff --git a/sci-biology/ncbi-tools/Manifest b/sci-biology/ncbi-tools/Manifest
index ec930730c52e..8163e2dfa539 100644
--- a/sci-biology/ncbi-tools/Manifest
+++ b/sci-biology/ncbi-tools/Manifest
@@ -1,11 +1,12 @@
-MD5 08ebfced341e696331edafdeeb4721fb ChangeLog 6236
+MD5 173b54d8fcaa23ee159384b4a9a706ba ChangeLog 6509
MD5 e8b4df3df76800c376905734d8043cfa metadata.xml 216
MD5 6c8b57dc3b8c8523ae2adb7a1a8f1ed3 ncbi-tools-20041020-r1.ebuild 5630
MD5 1bcb9734e24ba30ff06c0aa3eed9076d ncbi-tools-20050429.ebuild 5627
-MD5 af8431b22cc767f24e2363b49a9abf56 ncbi-tools-20050605.ebuild 5630
+MD5 b5be5910dff73e5b599890fe334c35d5 ncbi-tools-20050605.ebuild 5698
MD5 a5f54430f6f7422d75320e91068cae0b files/21ncbi-r1 232
MD5 756db6700c84d3b303bfc3d0a28871de files/21ncbi 166
MD5 9cef4ca17113d005c44d3bf3d330f747 files/digest-ncbi-tools-20050605 144
MD5 6fa8c1b5254e9c217c399c949bc75f45 files/digest-ncbi-tools-20041020-r1 144
MD5 ae77b2436a5f4dfcb6f71f2149782dc7 files/digest-ncbi-tools-20050429 144
MD5 23986a001c85eb8c2c319aacfa9cb40c files/ncbirc 33
+MD5 c7bf6b862417dcdfa07c60cd783392d7 files/ncbi-tools-20050605-lop.patch.gz 398
diff --git a/sci-biology/ncbi-tools/files/ncbi-tools-20050605-lop.patch.gz b/sci-biology/ncbi-tools/files/ncbi-tools-20050605-lop.patch.gz
new file mode 100644
index 000000000000..24a5b531c8ee
--- /dev/null
+++ b/sci-biology/ncbi-tools/files/ncbi-tools-20050605-lop.patch.gz
Binary files differ
diff --git a/sci-biology/ncbi-tools/ncbi-tools-20050605.ebuild b/sci-biology/ncbi-tools/ncbi-tools-20050605.ebuild
index 9b31bc68396c..d5a9d098809d 100644
--- a/sci-biology/ncbi-tools/ncbi-tools-20050605.ebuild
+++ b/sci-biology/ncbi-tools/ncbi-tools-20050605.ebuild
@@ -1,8 +1,8 @@
# Copyright 1999-2005 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools/ncbi-tools-20050605.ebuild,v 1.1 2005/08/06 22:34:10 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools/ncbi-tools-20050605.ebuild,v 1.2 2005/08/08 23:39:13 ranger Exp $
-inherit flag-o-matic toolchain-funcs
+inherit flag-o-matic toolchain-funcs eutils
DESCRIPTION="Development toolkit and applications (BLAST, entrez, ddv, udv, sequin...) for computational biology"
LICENSE="public-domain"
@@ -38,6 +38,8 @@ pkg_setup() {
src_unpack() {
unpack ${A}
+ use ppc64 && cd ${S} && epatch ${FILESDIR}/${P}-lop.patch.gz
+
if ! use X; then
cd ${S}/make
sed -e "s:\#set HAVE_OGL=0:set HAVE_OGL=0:" \