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authorJustin Lecher <jlec@gentoo.org>2012-04-26 16:06:44 +0000
committerJustin Lecher <jlec@gentoo.org>2012-04-26 16:06:44 +0000
commit101e2f07e373e5f02366bbd940d01aee7a01a89b (patch)
tree567bc3b8fede7d26077e580f7a3cb273ac76907a /sci-biology/tree-puzzle
parentsci-calculators/calcoo: Move to EAPI=4, added fix gold linker (diff)
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sci-biology/tree-puzzle: Move to EAPI=4
Package-Manager: portage-2.2.0_alpha101/cvs/Linux x86_64
Diffstat (limited to 'sci-biology/tree-puzzle')
-rw-r--r--sci-biology/tree-puzzle/ChangeLog7
-rw-r--r--sci-biology/tree-puzzle/Manifest14
-rw-r--r--sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild26
3 files changed, 26 insertions, 21 deletions
diff --git a/sci-biology/tree-puzzle/ChangeLog b/sci-biology/tree-puzzle/ChangeLog
index 5c6d5f08c2b5..dec1c08c776c 100644
--- a/sci-biology/tree-puzzle/ChangeLog
+++ b/sci-biology/tree-puzzle/ChangeLog
@@ -1,6 +1,9 @@
# ChangeLog for sci-biology/tree-puzzle
-# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/tree-puzzle/ChangeLog,v 1.15 2010/01/01 21:44:45 fauli Exp $
+# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/tree-puzzle/ChangeLog,v 1.16 2012/04/26 16:06:44 jlec Exp $
+
+ 26 Apr 2012; Justin Lecher <jlec@gentoo.org> tree-puzzle-5.2.ebuild:
+ Move to EAPI=4
01 Jan 2010; Christian Faulhammer <fauli@gentoo.org>
tree-puzzle-5.2.ebuild:
diff --git a/sci-biology/tree-puzzle/Manifest b/sci-biology/tree-puzzle/Manifest
index ddf16727d4cc..eeb8d92db491 100644
--- a/sci-biology/tree-puzzle/Manifest
+++ b/sci-biology/tree-puzzle/Manifest
@@ -1,14 +1,14 @@
-----BEGIN PGP SIGNED MESSAGE-----
-Hash: SHA1
+Hash: SHA512
DIST tree-puzzle-5.2.tar.gz 875142 RMD160 8a69f5ab2ad56a05c0faa6cd02e344c19271bf7a SHA1 fd52a9f04dc871b765d9f7464f68bdb8edc22e37 SHA256 3396d3b80b03b0600afb479dc33f0bd3e5631298337295a4fa454211ac44c3fb
-EBUILD tree-puzzle-5.2.ebuild 1389 RMD160 7439ce7debdd02672621f29e983b35d1addd6b3c SHA1 5b4ec655ca4ee7c5d7eba643867470715edf9045 SHA256 aefd9d9002a362d651d3184ad79cb23885d31b40093acf683dfd02e230d6e187
-MISC ChangeLog 2844 RMD160 66f2f3978fac565a4afc94925d6fb3f269b218bc SHA1 924c26c00f297174fcd2c9ebe99e8001a1abaaba SHA256 50df3235bc3957bf4b4d0213818489e618a92cfbb6653064a208f20290af1629
+EBUILD tree-puzzle-5.2.ebuild 1398 RMD160 d157e66bd7e305517609b7a14719b3972aba2e83 SHA1 5dcd2b638e14c8278c863948d470c7e6248d7133 SHA256 43ae57b37850399cc8345404ad1fc350492e6ededcc357e0f29726f23f34ffda
+MISC ChangeLog 2932 RMD160 b3786d3fdb4a89ec273961b0c6e944fc8576ba1c SHA1 b8fdd409bad129a693151bbc23cfb9843870a855 SHA256 2e0ee14c045c0f73b60e4b60205c3d71efa65d3b770e1657907943e10aae8221
MISC metadata.xml 1459 RMD160 1fd787e9bb6887264319e3484e30fd3612b855e0 SHA1 e3bcb0cffa751c79b5c61cb38e8006f368bd01d2 SHA256 ccefdd7d49206f9e090218494a5857e711977a75f24136f3916a34d4dab6219d
-----BEGIN PGP SIGNATURE-----
-Version: GnuPG v2.0.11 (GNU/Linux)
+Version: GnuPG v2.0.19 (GNU/Linux)
-iEYEARECAAYFAks+bNMACgkQNQqtfCuFneOe5wCeNi1sSUIrIAMXZyLRnKpMggaX
-JuYAoJillwa6inLM+dZSsCvkYYmZv3hf
-=AVUC
+iEYEAREKAAYFAk+ZcpkACgkQgAnW8HDreRZR3wCglHKTDb183XIpwJA7zcWn/Pja
+tZoAnAwHtj4lBU8WhGjAuCx0oqjTuDDV
+=/c0y
-----END PGP SIGNATURE-----
diff --git a/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild b/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild
index 5c22237acc30..1d5a2b540bb5 100644
--- a/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild
+++ b/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild
@@ -1,19 +1,22 @@
-# Copyright 1999-2010 Gentoo Foundation
+# Copyright 1999-2012 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild,v 1.10 2010/01/01 21:44:45 fauli Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild,v 1.11 2012/04/26 16:06:44 jlec Exp $
+
+EAPI=4
inherit toolchain-funcs
-DESCRIPTION="Maximum likelihood analysis for nucleotide, amino acid, and two-state data."
+DESCRIPTION="Maximum likelihood analysis for nucleotide, amino acid, and two-state data"
HOMEPAGE="http://www.tree-puzzle.de"
SRC_URI="http://www.tree-puzzle.de/${P}.tar.gz"
-LICENSE="GPL-2"
+LICENSE="GPL-2"
SLOT="0"
KEYWORDS="~amd64 ~ppc x86 ~amd64-linux ~x86-linux ~ppc-macos"
IUSE="mpi"
DEPEND="mpi? ( sys-cluster/lam-mpi )"
+RDEPEND="${DEPEND}"
pkg_setup () {
use mpi && [ $(tc-getCC) = icc ] && die "The parallelized version of tree-puzzle cannot be compiled using icc.
@@ -21,16 +24,15 @@ pkg_setup () {
version of the program, or use gcc as your compiler (CC=\"gcc\")."
}
-src_compile() {
- econf || die
- cd ${S}/src
+src_prepare() {
if ! use mpi; then
- sed -e 's:bin_PROGRAMS = puzzle$(EXEEXT) ppuzzle:bin_PROGRAMS = puzzle :' \
- -e 's:DIST_SOURCES = $(ppuzzle_SOURCES) $(puzzle_SOURCES):DIST_SOURCES = $(puzzle_SOURCES):' \
- -i Makefile || die
+ cd ${S}/src
+ sed \
+ -e 's:bin_PROGRAMS = puzzle$(EXEEXT) ppuzzle:bin_PROGRAMS = puzzle :' \
+ -e 's:DIST_SOURCES = $(ppuzzle_SOURCES) $(puzzle_SOURCES):DIST_SOURCES = $(puzzle_SOURCES):' \
+ -i Makefile || die
+ cd ${S}
fi
- cd ${S}
- emake || die
}
src_install() {