New version

Package-Manager: portage-2.0.53

4 files changed, 56 insertions, 7 deletions

diff --git a/sci-biology/rebase/ChangeLog b/sci-biology/rebase/ChangeLog
index a5a09324b8e9..f56848e581a4 100644
--- a/sci-biology/rebase/ChangeLog
+++ b/sci-biology/rebase/ChangeLog
@@ -1,6 +1,11 @@
 # ChangeLog for sci-biology/rebase
-# Copyright 2000-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.45 2005/12/24 00:01:29 blubb Exp $
+# Copyright 2000-2006 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.46 2006/01/07 04:05:10 ribosome Exp $
+
+*rebase-601 (07 Jan 2006)
+
+  07 Jan 2006; Olivier Fisette <ribosome@gentoo.org> +rebase-601.ebuild:
+  New version.
 
   24 Dec 2005; Simon Stelling <blubb@gentoo.org> rebase-511.ebuild:
   stable on amd64
diff --git a/sci-biology/rebase/Manifest b/sci-biology/rebase/Manifest
index 453d288afc81..14041cd0b180 100644
--- a/sci-biology/rebase/Manifest
+++ b/sci-biology/rebase/Manifest
@@ -1,8 +1,10 @@
-MD5 9a3b54f5fd7c7792a166ead7531aa18b ChangeLog 6641
+MD5 37135347cf2645605c503feca2af1d2b ChangeLog 6760
+MD5 8b72021e3a53e0c9ab7acaf2d016637e files/digest-rebase-509 63
+MD5 de0923d154ca7a32f45ee6bb9d3a40c4 files/digest-rebase-511 63
+MD5 0327e485fe0040317dd1016583b0d76d files/digest-rebase-512 63
+MD5 9b37c587b84cf914d6f9a9b616c493db files/digest-rebase-601 63
 MD5 550f8d428f3e75690b43d32df6aa60cd metadata.xml 900
 MD5 b4f7769279c4301bacb9c4b78f136d08 rebase-509.ebuild 1097
-MD5 c71955691f0a401b393f59ab0dc5d0e4 rebase-512.ebuild 1244
 MD5 fe94217aa8122be5dc5855d73772d8b0 rebase-511.ebuild 1237
-MD5 8b72021e3a53e0c9ab7acaf2d016637e files/digest-rebase-509 63
-MD5 0327e485fe0040317dd1016583b0d76d files/digest-rebase-512 63
-MD5 de0923d154ca7a32f45ee6bb9d3a40c4 files/digest-rebase-511 63
+MD5 c71955691f0a401b393f59ab0dc5d0e4 rebase-512.ebuild 1244
+MD5 ac62c4563f22a49719f3623d9e163ce1 rebase-601.ebuild 1244
diff --git a/sci-biology/rebase/files/digest-rebase-601 b/sci-biology/rebase/files/digest-rebase-601
new file mode 100644
index 000000000000..514623f4bd95
--- /dev/null
+++ b/sci-biology/rebase/files/digest-rebase-601
@@ -0,0 +1 @@
+MD5 473a812ec6119fb8b02ac3e0bfec6884 rebase-601.tar.bz2 181829
diff --git a/sci-biology/rebase/rebase-601.ebuild b/sci-biology/rebase/rebase-601.ebuild
new file mode 100644
index 000000000000..f1a9ebf3bdbb
--- /dev/null
+++ b/sci-biology/rebase/rebase-601.ebuild
@@ -0,0 +1,41 @@
+# Copyright 1999-2006 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-601.ebuild,v 1.1 2006/01/07 04:05:10 ribosome Exp $
+
+DESCRIPTION="A restriction enzyme database"
+LICENSE="public-domain"
+HOMEPAGE="http://rebase.neb.com"
+SRC_URI="mirror://gentoo/${P}.tar.bz2"
+
+SLOT="0"
+# Minimal build keeps only the indexed files (if applicable) and the
+# documentation. The non-indexed database is not installed.
+IUSE="emboss minimal"
+KEYWORDS="~x86 ~ppc ~amd64 ~ppc-macos ~ppc64"
+
+DEPEND="emboss? ( sci-biology/emboss )"
+
+src_compile() {
+	if use emboss; then
+		echo
+		einfo "Indexing ${PN} for usage with EMBOSS."
+		mkdir REBASE
+		EMBOSS_DATA=. rebaseextract -auto -infile withrefm.${PV} \
+			-protofile proto.${PV} || die "Indexing ${PN} failed."
+		echo
+	fi
+}
+
+src_install() {
+	if ! use minimal; then
+		insinto /usr/share/${PN}
+		doins withrefm.${PV} proto.${PV} || die \
+			"Failed to install raw database."
+	fi
+	newdoc REBASE.DOC README || die "Failed to install documentation."
+	if use emboss; then
+		insinto /usr/share/EMBOSS/data/REBASE
+		doins REBASE/{embossre.enz,embossre.ref,embossre.sup} || die \
+			"Failed to install EMBOSS data files."
+	fi
+}