diff options
author | Olivier Fisette <ribosome@gentoo.org> | 2006-04-20 01:09:45 +0000 |
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committer | Olivier Fisette <ribosome@gentoo.org> | 2006-04-20 01:09:45 +0000 |
commit | 2de224c40636c5ca43074f7abff40d0bd425ee0f (patch) | |
tree | 86a9711819c6068e07f5b82c7c3bc4b44637854c /sci-biology/emboss | |
parent | Version bump and closing bug #128183. (diff) | |
download | historical-2de224c40636c5ca43074f7abff40d0bd425ee0f.tar.gz historical-2de224c40636c5ca43074f7abff40d0bd425ee0f.tar.bz2 historical-2de224c40636c5ca43074f7abff40d0bd425ee0f.zip |
Removed old revision
Package-Manager: portage-2.0.54
Diffstat (limited to 'sci-biology/emboss')
-rw-r--r-- | sci-biology/emboss/ChangeLog | 5 | ||||
-rw-r--r-- | sci-biology/emboss/Manifest | 20 | ||||
-rw-r--r-- | sci-biology/emboss/emboss-3.0.0.ebuild | 60 | ||||
-rw-r--r-- | sci-biology/emboss/files/digest-emboss-3.0.0 | 1 |
4 files changed, 5 insertions, 81 deletions
diff --git a/sci-biology/emboss/ChangeLog b/sci-biology/emboss/ChangeLog index 6d2282c06267..a0ea73cb44fd 100644 --- a/sci-biology/emboss/ChangeLog +++ b/sci-biology/emboss/ChangeLog @@ -1,6 +1,9 @@ # ChangeLog for sci-biology/emboss # Copyright 2000-2006 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/emboss/ChangeLog,v 1.32 2006/04/08 10:32:30 blubb Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/emboss/ChangeLog,v 1.33 2006/04/20 01:09:45 ribosome Exp $ + + 20 Apr 2006; Olivier Fisette <ribosome@gentoo.org> -emboss-3.0.0.ebuild: + Removed old revision. 08 Apr 2006; Simon Stelling <blubb@gentoo.org> emboss-3.0.0-r1.ebuild: stable on amd64 diff --git a/sci-biology/emboss/Manifest b/sci-biology/emboss/Manifest index 0b870b6189db..eb84d75682de 100644 --- a/sci-biology/emboss/Manifest +++ b/sci-biology/emboss/Manifest @@ -1,24 +1,6 @@ -MD5 f3e523c77235fd30e2fd19028e0bc8ec ChangeLog 6384 -RMD160 f8b87e2d04a485dd64266fbd1b4e8f2db1d23fc4 ChangeLog 6384 -SHA256 0dac3b3dc872a28305a51173b6dd7aae599fb01d2eb5ca74d1e7a5e80be259a4 ChangeLog 6384 +MD5 95d37ca94e9f151baa361c99256be065 ChangeLog 6487 MD5 4194379dc2f45d117ac8eba69934c27d emboss-3.0.0-r1.ebuild 2948 -RMD160 f11fdb1915a5d2617ec7fac90eac23a28a995d5b emboss-3.0.0-r1.ebuild 2948 -SHA256 5746e17de8b1b4c0523b4cf04e721312b4890299311393b076d5551e85cf87d7 emboss-3.0.0-r1.ebuild 2948 -MD5 ecb49ecef824e368a8ad751b90f19186 emboss-3.0.0.ebuild 1854 -RMD160 61caa32788eb59c1d207931d5c499a4016e79be8 emboss-3.0.0.ebuild 1854 -SHA256 6d313c87e265580ceb2af86c30851763cc2efec96f1315dca4b0d5eaa6c721d9 emboss-3.0.0.ebuild 1854 MD5 ef2dfa3d13837026f59c0cf5f04f67c5 files/22emboss-r1 110 -RMD160 aa416dbfca66cc7822ed162122addadde2756c66 files/22emboss-r1 110 -SHA256 cf3bd3b8d2638a0cd14e57839033d63c855114a0e12883bbc7a5106b0cfc01ad files/22emboss-r1 110 MD5 615888722f8d6a0c918f936e0cc1cfcd files/README.Gentoo 1326 -RMD160 bfaa4d7d1218d3bd4ea58d54d000da7f58b6bca6 files/README.Gentoo 1326 -SHA256 33b517b977cc85824847bd6cf4113489a5554fb014f1a6b1d22d6f80c3487e9f files/README.Gentoo 1326 -MD5 84fbde044d74a82c084fa22d5d59ae8e files/digest-emboss-3.0.0 66 -RMD160 bacfaf49534b5313c65e3969685f9867550c34b0 files/digest-emboss-3.0.0 66 -SHA256 bdca0dd643312ce9f1a2bbeec7c2098c12ad1427ce475be0d73270a4b4eee891 files/digest-emboss-3.0.0 66 MD5 84fbde044d74a82c084fa22d5d59ae8e files/digest-emboss-3.0.0-r1 66 -RMD160 bacfaf49534b5313c65e3969685f9867550c34b0 files/digest-emboss-3.0.0-r1 66 -SHA256 bdca0dd643312ce9f1a2bbeec7c2098c12ad1427ce475be0d73270a4b4eee891 files/digest-emboss-3.0.0-r1 66 MD5 6051afb1f26bf343082490327784b958 metadata.xml 1013 -RMD160 ba2d432b51362211447beda69549987694cf310f metadata.xml 1013 -SHA256 5f7476f5baa4784437a557d03e600b491ef44b12abadffb513a59b79993a0047 metadata.xml 1013 diff --git a/sci-biology/emboss/emboss-3.0.0.ebuild b/sci-biology/emboss/emboss-3.0.0.ebuild deleted file mode 100644 index 5987a6788705..000000000000 --- a/sci-biology/emboss/emboss-3.0.0.ebuild +++ /dev/null @@ -1,60 +0,0 @@ -# Copyright 1999-2005 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/emboss/emboss-3.0.0.ebuild,v 1.9 2005/12/14 03:28:52 spyderous Exp $ - -DESCRIPTION="The European Molecular Biology Open Software Suite - A sequence analysis package" -HOMEPAGE="http://emboss.sourceforge.net/" -SRC_URI="ftp://${PN}.open-bio.org/pub/EMBOSS/EMBOSS-${PV}.tar.gz" -LICENSE="GPL-2 LGPL-2" - -SLOT="0" -KEYWORDS="amd64 ppc ppc-macos ppc64 x86" -IUSE="X png minimal" - -DEPEND="X? ( || ( x11-libs/libXt virtual/x11 ) ) - png? ( - sys-libs/zlib - media-libs/libpng - >=media-libs/gd-1.8 - ) - !minimal? ( - sci-biology/primer3 - sci-biology/clustalw - )" - -PDEPEND="!minimal? ( - sci-biology/aaindex - sci-biology/cutg - sci-biology/prints - >=sci-biology/prosite-19.7 - sci-biology/rebase - sci-biology/transfac - )" - -S=${WORKDIR}/EMBOSS-${PV} - -src_compile() { - EXTRA_CONF="--includedir=${D}/usr/include/emboss" - ! use X && EXTRA_CONF="${EXTRA_CONF} --without-x" - ! use png && EXTRA_CONF="${EXTRA_CONF} --without-pngdriver" - - econf ${EXTRA_CONF} || die - # Do not install the JEMBOSS component (the --without-java configure option - # does not work). JEMBOSS will be available as a separate package. - sed -i -e 's/SUBDIRS = plplot ajax nucleus emboss test doc jemboss/SUBDIRS = plplot ajax nucleus emboss test doc/' Makefile || die - emake || die -} - -src_install() { - einstall || die - dodoc AUTHORS ChangeLog FAQ NEWS README THANKS - - # Install env file for setting libplplot and acd files path. - insinto /etc/env.d - newins ${FILESDIR}/22emboss-r1 22emboss - - # Symlink preinstalled docs to /usr/share/doc. - dosym /usr/share/EMBOSS/doc/manuals /usr/share/doc/${PF}/manuals - dosym /usr/share/EMBOSS/doc/programs /usr/share/doc/${PF}/programs - dosym /usr/share/EMBOSS/doc/tutorials /usr/share/doc/${PF}/tutorials -} diff --git a/sci-biology/emboss/files/digest-emboss-3.0.0 b/sci-biology/emboss/files/digest-emboss-3.0.0 deleted file mode 100644 index 5dfd3480a664..000000000000 --- a/sci-biology/emboss/files/digest-emboss-3.0.0 +++ /dev/null @@ -1 +0,0 @@ -MD5 fa72feded9ab9272e3e731c09f545dcc EMBOSS-3.0.0.tar.gz 16257908 |