diff options
| -rw-r--r-- | sci-biology/seaview/ChangeLog | 8 | ||||
| -rw-r--r-- | sci-biology/seaview/files/digest-seaview-20070919 | 3 | ||||
| -rw-r--r-- | sci-biology/seaview/seaview-20041220.ebuild | 6 | ||||
| -rw-r--r-- | sci-biology/seaview/seaview-20060213.ebuild | 6 | ||||
| -rw-r--r-- | sci-biology/seaview/seaview-20070919.ebuild | 45 |
5 files changed, 61 insertions, 7 deletions
diff --git a/sci-biology/seaview/ChangeLog b/sci-biology/seaview/ChangeLog index 07f83385f0d9..2bc3722d2c1f 100644 --- a/sci-biology/seaview/ChangeLog +++ b/sci-biology/seaview/ChangeLog @@ -1,6 +1,12 @@ # ChangeLog for sci-biology/seaview # Copyright 2000-2007 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/seaview/ChangeLog,v 1.10 2007/03/25 02:58:30 kugelfang Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/seaview/ChangeLog,v 1.11 2007/10/21 04:34:16 je_fro Exp $ + +*seaview-20070919 (21 Oct 2007) + + 21 Oct 2007; <jeff@gentoo.org> seaview-20041220.ebuild, + seaview-20060213.ebuild, +seaview-20070919.ebuild: + Bumping to latest version which contains several new features. 25 Mar 2007; Danny van Dyk <kugelfang@gentoo.org> seaview-20041220.ebuild, seaview-20060213.ebuild: diff --git a/sci-biology/seaview/files/digest-seaview-20070919 b/sci-biology/seaview/files/digest-seaview-20070919 new file mode 100644 index 000000000000..e8fa4d2c65e9 --- /dev/null +++ b/sci-biology/seaview/files/digest-seaview-20070919 @@ -0,0 +1,3 @@ +MD5 aa7a0d87d2cf4a69d3b639ac9c1aef06 seaview-20070919.tar.bz2 129867 +RMD160 a930e5286c8e2c82dd1b7d33f15682b525a83f4f seaview-20070919.tar.bz2 129867 +SHA256 4c2b3d1e051f72194dc1b7fc742ed92c97f86926615fbd768b2f2e3cff7fea33 seaview-20070919.tar.bz2 129867 diff --git a/sci-biology/seaview/seaview-20041220.ebuild b/sci-biology/seaview/seaview-20041220.ebuild index 5ca779cbce64..84604b274abc 100644 --- a/sci-biology/seaview/seaview-20041220.ebuild +++ b/sci-biology/seaview/seaview-20041220.ebuild @@ -1,6 +1,6 @@ # Copyright 1999-2007 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/seaview/seaview-20041220.ebuild,v 1.4 2007/03/25 02:58:30 kugelfang Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/seaview/seaview-20041220.ebuild,v 1.5 2007/10/21 04:34:16 je_fro Exp $ inherit toolchain-funcs multilib @@ -18,7 +18,7 @@ DEPEND="x11-libs/fltk src_unpack() { unpack ${A} - cd ${S} + cd "${S}" sed -i \ -e "s%\"seaview.help\", %\"/usr/share/${PN}/seaview.help\", %" seaview.cxx || die @@ -40,6 +40,6 @@ src_unpack() { src_install() { dobin seaview seaview_align.sh - insinto /usr/share/${PN} + insinto "/usr/share/${PN}" doins protein.mase seaview.help } diff --git a/sci-biology/seaview/seaview-20060213.ebuild b/sci-biology/seaview/seaview-20060213.ebuild index b2563b0178fa..f84d2bc78214 100644 --- a/sci-biology/seaview/seaview-20060213.ebuild +++ b/sci-biology/seaview/seaview-20060213.ebuild @@ -1,6 +1,6 @@ # Copyright 1999-2007 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/seaview/seaview-20060213.ebuild,v 1.2 2007/03/25 02:58:30 kugelfang Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/seaview/seaview-20060213.ebuild,v 1.3 2007/10/21 04:34:16 je_fro Exp $ inherit toolchain-funcs multilib @@ -19,7 +19,7 @@ DEPEND="x11-libs/fltk src_unpack() { unpack ${A} - cd ${S} + cd "${S}" sed -i \ -e "s%\"seaview.help\", %\"/usr/share/${PN}/seaview.help\", %" seaview.cxx || die @@ -41,6 +41,6 @@ src_unpack() { src_install() { dobin seaview seaview_align.sh - insinto /usr/share/${PN} + insinto "/usr/share/${PN}" doins protein.mase seaview.help } diff --git a/sci-biology/seaview/seaview-20070919.ebuild b/sci-biology/seaview/seaview-20070919.ebuild new file mode 100644 index 000000000000..0eae06fecde1 --- /dev/null +++ b/sci-biology/seaview/seaview-20070919.ebuild @@ -0,0 +1,45 @@ +# Copyright 1999-2007 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/seaview/seaview-20070919.ebuild,v 1.1 2007/10/21 04:34:16 je_fro Exp $ + +inherit toolchain-funcs multilib + +DESCRIPTION="A graphical multiple sequence alignment editor" +HOMEPAGE="http://pbil.univ-lyon1.fr/software/seaview.html" +SRC_URI="mirror://gentoo/${P}.tar.bz2" +LICENSE="public-domain" + +SLOT="0" +KEYWORDS="~x86 ~ppc ~amd64" +IUSE="" + +DEPEND="x11-libs/fltk + =media-libs/pdflib-6.0* + sci-biology/clustalw" + +src_unpack() { + unpack ${A} + cd "${S}" + + # Respect CXXFLAGS. Package uses CFLAGS as CXXFLAGS. + # Fix invocation of C++ compiler. + # Fix include and library paths. + sed -i \ + -e '/^FLTK/d' \ + -e '/^X11/d' \ + -e 's:#HELP_NOT:HELP_NOT:' \ + -e "s:bge\/mgouy\/seaview:usr/share/${PN}:" \ + -e "s:^CXX.*:CXX = $(tc-getCXX):" \ + -e 's:-I$(FLTK):-I/usr/include/fltk-1.1:' \ + -e 's:-I$(X11)/include:-I/usr/include/X11R6:' \ + -e "s:\(^CFLAGS .*\):\1 ${CXXFLAGS}:" \ + -e "s:-L\$(FLTK)/lib:-L/usr/$(get_libdir)/fltk-1.1:" \ + -e "s:-L\$(X11)/lib:-L/usr/$(get_libdir)/X11:" \ + Makefile || die +} + +src_install() { + dobin seaview seaview_align.sh + insinto "/usr/share/${PN}" + doins protein.mase seaview.help +} |