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authorJustin Lecher <jlec@gentoo.org>2013-03-09 19:24:45 +0000
committerJustin Lecher <jlec@gentoo.org>2013-03-09 19:24:45 +0000
commitc26a87ccfd24a4effaee5ebd60fdf1e6c0d398be (patch)
tree320fdadd5755accab0ff74f010c073a496e254d1 /sci-biology
parentStable for sparc, wrt bug #460188 (diff)
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sci-biology/eugene: Version Bump; drop maintainer
(Portage version: 2.2.0_alpha166/cvs/Linux x86_64, signed Manifest commit with key 8009D6F070EB7916)
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/eugene/ChangeLog10
-rw-r--r--sci-biology/eugene/eugene-4.1.ebuild45
-rw-r--r--sci-biology/eugene/metadata.xml6
3 files changed, 54 insertions, 7 deletions
diff --git a/sci-biology/eugene/ChangeLog b/sci-biology/eugene/ChangeLog
index 00cc0679d2ac..2d7b7d457766 100644
--- a/sci-biology/eugene/ChangeLog
+++ b/sci-biology/eugene/ChangeLog
@@ -1,6 +1,12 @@
# ChangeLog for sci-biology/eugene
-# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/eugene/ChangeLog,v 1.9 2011/02/11 19:51:04 hwoarang Exp $
+# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/eugene/ChangeLog,v 1.10 2013/03/09 19:24:44 jlec Exp $
+
+*eugene-4.1 (09 Mar 2013)
+
+ 09 Mar 2013; Justin Lecher <jlec@gentoo.org> +eugene-4.1.ebuild,
+ metadata.xml:
+ Version Bump; drop maintainer
11 Feb 2011; Markos Chandras <hwoarang@gentoo.org> eugene-3.6-r1.ebuild:
Stable on amd64 wrt bug #353575
diff --git a/sci-biology/eugene/eugene-4.1.ebuild b/sci-biology/eugene/eugene-4.1.ebuild
new file mode 100644
index 000000000000..15a663c1e63f
--- /dev/null
+++ b/sci-biology/eugene/eugene-4.1.ebuild
@@ -0,0 +1,45 @@
+# Copyright 1999-2013 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/eugene/eugene-4.1.ebuild,v 1.1 2013/03/09 19:24:45 jlec Exp $
+
+EAPI=5
+
+inherit autotools eutils
+
+DESCRIPTION="Eukaryotic gene predictor"
+HOMEPAGE="http://www.inra.fr/mia/T/EuGene/"
+SRC_URI="https://mulcyber.toulouse.inra.fr/frs/download.php/1157/${P}.tar.gz"
+
+LICENSE="Artistic"
+SLOT="0"
+IUSE="doc"
+KEYWORDS="~amd64 ~x86"
+
+DEPEND="
+ media-libs/gd[png]
+ media-libs/libpng
+ doc? ( dev-lang/tcl
+ dev-texlive/texlive-latex
+ dev-texlive/texlive-latexrecommended
+ dev-texlive/texlive-latexextra
+ )"
+RDEPEND="${DEPEND}"
+
+RESTRICT="test"
+
+src_prepare() {
+ # https://mulcyber.toulouse.inra.fr/tracker/index.php?func=detail&aid=1170
+ epatch \
+ "${FILESDIR}"/${PN}-3.6-overflow.patch \
+ "${FILESDIR}"/${PN}-3.6-plugins.patch
+ if ( ! use doc ); then
+ sed -i -e '/SUBDIRS/ s/doc//' \
+ -e '/INSTALL.*doc/ s/\(.*\)//' \
+ Makefile.am || die
+ eautoreconf
+ fi
+}
+
+src_install() {
+ emake DESTDIR="${D}" install || die
+}
diff --git a/sci-biology/eugene/metadata.xml b/sci-biology/eugene/metadata.xml
index 3302123e5718..f17a827e3101 100644
--- a/sci-biology/eugene/metadata.xml
+++ b/sci-biology/eugene/metadata.xml
@@ -1,9 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer>
- <email>weaver@gentoo.org</email>
- <name>Andrey Kislyuk</name>
- </maintainer>
- <herd>sci-biology</herd>
+ <herd>sci-biology</herd>
</pkgmetadata>