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authorOlivier Fisette <ribosome@gentoo.org>2006-03-15 14:33:47 +0000
committerOlivier Fisette <ribosome@gentoo.org>2006-03-15 14:33:47 +0000
commita06d017c1383e11e040f76580a26b6eac6756691 (patch)
treeb3c20f9809dd727e2d2b8672cb9389c5c32a1de9 /sci-biology/prosite
parentAdding several patches to fix lib64 path errors, supporting newer rbac grsec ... (diff)
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New version
(Portage version: 2.0.54)
Diffstat (limited to 'sci-biology/prosite')
-rw-r--r--sci-biology/prosite/ChangeLog7
-rw-r--r--sci-biology/prosite/Manifest26
-rw-r--r--sci-biology/prosite/files/digest-prosite-19.221
-rw-r--r--sci-biology/prosite/prosite-19.22.ebuild40
4 files changed, 49 insertions, 25 deletions
diff --git a/sci-biology/prosite/ChangeLog b/sci-biology/prosite/ChangeLog
index a65f9cbd32b7..10c65dd79a4d 100644
--- a/sci-biology/prosite/ChangeLog
+++ b/sci-biology/prosite/ChangeLog
@@ -1,6 +1,11 @@
# ChangeLog for sci-biology/prosite
# Copyright 2000-2006 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/prosite/ChangeLog,v 1.75 2006/02/22 21:04:48 grobian Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/prosite/ChangeLog,v 1.76 2006/03/15 14:33:47 ribosome Exp $
+
+*prosite-19.22 (15 Mar 2006)
+
+ 15 Mar 2006; Olivier Fisette <ribosome@gentoo.org> +prosite-19.22.ebuild:
+ New version.
22 Feb 2006; Fabian Groffen <grobian@gentoo.org> prosite-19.18.ebuild:
Marked ppc-macos stable (bug #123334)
diff --git a/sci-biology/prosite/Manifest b/sci-biology/prosite/Manifest
index 01786f972efe..710718488ea9 100644
--- a/sci-biology/prosite/Manifest
+++ b/sci-biology/prosite/Manifest
@@ -1,36 +1,14 @@
MD5 096b7d8e66a12a851726b5ab34a1f2fb ChangeLog 11705
-RMD160 efdc5863eed3443f20980dd8d99422e0f73c4d8d ChangeLog 11705
-SHA256 22c067c4af7021078c37746bb46346b5e7ec9b391e7908329bde9022247e48cd ChangeLog 11705
MD5 2f35d065ff4b9256d80f3923fa864c5c files/digest-prosite-19.16 67
-RMD160 fe669c23fd4cad9e4bb61e3fe24cd11a544eee90 files/digest-prosite-19.16 67
-SHA256 bc527623b4a4462badfc534a31167d6481e0c6f9bdd7c692d79ad9ada2af5cbe files/digest-prosite-19.16 67
MD5 88309b107f8fd9445fb2370e95506eff files/digest-prosite-19.17 67
-RMD160 4698c250c8d9fdf1b57ee8e7283a1cd12ee41858 files/digest-prosite-19.17 67
-SHA256 daa20d7935177e72692da67cc418684c719e7decda65e091ff1ccfafec48a7b6 files/digest-prosite-19.17 67
MD5 a652d8b43037190415fe10e9282d838f files/digest-prosite-19.18 67
-RMD160 dbda98722b5c60df16cc2520ea5bd74bde7846eb files/digest-prosite-19.18 67
-SHA256 c08859bc6f93dd250ac7e19968c31467da734c4c408ae48d59b1b9c9a8a47603 files/digest-prosite-19.18 67
MD5 db4add7ca9d25fb3c90e646c88d6f562 files/digest-prosite-19.19 67
-RMD160 46a87c396366cc756097815f2245153bc1cada79 files/digest-prosite-19.19 67
-SHA256 fd4788c8dc4520b4ffc54a20a33e73ea0cf0fceda2295860a115e6145ff39ce0 files/digest-prosite-19.19 67
MD5 9676c19817d33959f3d396ba9bd29642 files/digest-prosite-19.20 67
-RMD160 bd84a5ac854848a646a1b8ea8865c76978e301e6 files/digest-prosite-19.20 67
-SHA256 a7b26bc40e915ed2ee01677c5d52dc7b5058d2990f0b62b402d13fc0f1cfc88a files/digest-prosite-19.20 67
+MD5 ce741f14b29ee8a8a5109073ea6940be files/digest-prosite-19.22 67
MD5 81b73af5f2f4778bea2dde0b55620129 metadata.xml 810
-RMD160 a0acc8bc90197c6e5e9814044b11a02f15e4c398 metadata.xml 810
-SHA256 432b03b079022cf13e6cdbcb2455fb10ac5a95a8b3f41c63f76212a5e7f67c65 metadata.xml 810
MD5 fd8571a2c6a6d2a8c66c39dfb6bcefe2 prosite-19.16.ebuild 1240
-RMD160 45814dfb20b6f877b9952ff6ef4f68e55c6e44a2 prosite-19.16.ebuild 1240
-SHA256 0fcf024a6c3f15a5e4d7db6db4063bfd604bb9d58e9ab5fdfa489d38050c315c prosite-19.16.ebuild 1240
MD5 98de3c18be9fae196528dc1ae064a614 prosite-19.17.ebuild 1246
-RMD160 2d0794ca45fd388ec1283237db5e1088f06a5793 prosite-19.17.ebuild 1246
-SHA256 f93c4086e3fd3c6cce86fb191e1b8172e2305de3360eda55e29f064819b8759f prosite-19.17.ebuild 1246
MD5 816bdf1daa3b43ac3e34ee2e29c30266 prosite-19.18.ebuild 1241
-RMD160 5584d647a481c05bfdee2bf5d80d8fc2cc540d04 prosite-19.18.ebuild 1241
-SHA256 f09a7c61dcee87e514b871bfa41990118cf7e8fa07bb6eb5524758cbefaf161f prosite-19.18.ebuild 1241
MD5 4bc992bd06b47b580178c21734648c37 prosite-19.19.ebuild 1246
-RMD160 658320982caa1c7cde80b465e7b49d34be2392b7 prosite-19.19.ebuild 1246
-SHA256 9465431c4f32fe918b2c8f41144c1d4de5367d81814a4d56421e94d7b2fa9e43 prosite-19.19.ebuild 1246
MD5 3521d2f54ad4949ea85492479fb905c9 prosite-19.20.ebuild 1246
-RMD160 f55a25984cfb7fccec7bcba50b2693a34c2328ee prosite-19.20.ebuild 1246
-SHA256 121f3266f4330d4e88bfe7814429c38cbd99413043eb9db44099965e91658fbd prosite-19.20.ebuild 1246
+MD5 3521d2f54ad4949ea85492479fb905c9 prosite-19.22.ebuild 1246
diff --git a/sci-biology/prosite/files/digest-prosite-19.22 b/sci-biology/prosite/files/digest-prosite-19.22
new file mode 100644
index 000000000000..cde64b7bc554
--- /dev/null
+++ b/sci-biology/prosite/files/digest-prosite-19.22
@@ -0,0 +1 @@
+MD5 f772e98f52e517b935ab80eec20872c8 prosite-19.22.tar.bz2 4015769
diff --git a/sci-biology/prosite/prosite-19.22.ebuild b/sci-biology/prosite/prosite-19.22.ebuild
new file mode 100644
index 000000000000..1772df3cf751
--- /dev/null
+++ b/sci-biology/prosite/prosite-19.22.ebuild
@@ -0,0 +1,40 @@
+# Copyright 1999-2006 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/prosite/prosite-19.22.ebuild,v 1.1 2006/03/15 14:33:47 ribosome Exp $
+
+DESCRIPTION="A protein families and domains database"
+LICENSE="swiss-prot"
+HOMEPAGE="http://ca.expasy.org/prosite"
+SRC_URI="mirror://gentoo/${P}.tar.bz2"
+
+SLOT="0"
+# Minimal build keeps only the indexed files (if applicable) and the
+# documentation. The non-indexed database is not installed.
+IUSE="emboss minimal"
+KEYWORDS="~amd64 ~ppc ~ppc-macos ~ppc64 ~x86"
+
+DEPEND="emboss? ( >=sci-biology/emboss-3.0.0 )"
+
+src_compile() {
+ if use emboss; then
+ mkdir PROSITE
+ echo
+ einfo "Indexing PROSITE for usage with EMBOSS."
+ EMBOSS_DATA="." prosextract -auto -prositedir "${S}" || die \
+ "Indexing PROSITE failed."
+ echo
+ fi
+}
+
+src_install() {
+ if ! use minimal; then
+ insinto /usr/share/${PN}
+ doins ${PN}.{doc,dat,lis} || die "Installing raw database failed."
+ fi
+ dodoc *.txt || die "Documentation installation failed."
+ dohtml *.htm || die "HTML documentation installation failed."
+ if use emboss; then
+ insinto /usr/share/EMBOSS/data/PROSITE
+ doins PROSITE/* || die "Installing EMBOSS data files failed."
+ fi
+}