Fix bug #80778

(Portage version: 2.0.51-r15)

5 files changed, 148 insertions, 1 deletions

diff --git a/sci-biology/foldingathome/ChangeLog b/sci-biology/foldingathome/ChangeLog
index 1a4b645d9f20..2877537959f5 100644
--- a/sci-biology/foldingathome/ChangeLog
+++ b/sci-biology/foldingathome/ChangeLog
@@ -1,6 +1,12 @@
 # ChangeLog for sci-biology/foldingathome
 # Copyright 2002-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/foldingathome/ChangeLog,v 1.4 2005/02/04 20:57:01 lostlogic Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/foldingathome/ChangeLog,v 1.5 2005/02/06 01:02:39 lostlogic Exp $
+
+*foldingathome-5.0.2-r3 (05 Feb 2005)
+
+  05 Feb 2005; Brandon Low <lostlogic@gentoo.org> +files/init-5.0.2-r3,
+  +foldingathome-5.0.2-r3.ebuild:
+  Fix bug #80778
 
 *foldingathome-5.0.2-r2 (04 Feb 2005)
 
diff --git a/sci-biology/foldingathome/Manifest b/sci-biology/foldingathome/Manifest
index 186b00d4366b..24b05ad811dd 100644
--- a/sci-biology/foldingathome/Manifest
+++ b/sci-biology/foldingathome/Manifest
@@ -1,5 +1,6 @@
 MD5 0e1014eb4bdefeb4d6917bac1a827c2a foldingathome-4.0.0-r2.ebuild 1908
 MD5 39f6c517e55816697980342d76e16838 foldingathome-5.0.2-r1.ebuild 2018
+MD5 3ff39fbdcf78b5fc7ac14160c9cafefb foldingathome-5.0.2-r3.ebuild 2020
 MD5 e5275a69ca715ca6a2fdddf88af0f01e foldingathome-4.0.0.ebuild 1452
 MD5 3ff39fbdcf78b5fc7ac14160c9cafefb foldingathome-5.0.2-r2.ebuild 2020
 MD5 13e9c81cb0d4ff45adfc86352c3c3ca4 ChangeLog 4416
@@ -9,6 +10,7 @@ MD5 a586f7af900f3c15982e59730e7e082a files/folding-conf.d 1125
 MD5 91f88a421f87928d798002ede77fa8f9 files/initfolding 80
 MD5 2f181dd626be0626fc9000536fd0d4c4 files/digest-foldingathome-5.0.2-r1 61
 MD5 2f181dd626be0626fc9000536fd0d4c4 files/digest-foldingathome-5.0.2-r2 61
+MD5 2f181dd626be0626fc9000536fd0d4c4 files/digest-foldingathome-5.0.2-r3 61
 MD5 76b9bbe1167870a4cd58351bc530cc87 files/folding-init.d 538
 MD5 cd07557b5a0c08853562d0a5ae204d78 files/copy_client_config 756
 MD5 9c93f287339458f575ee4c5d20fffdfe files/initfolding-r1 656
@@ -22,6 +24,7 @@ MD5 514c0c505246323c8abb6fa13a8671c7 files/folding-init.d-r4 1160
 MD5 aec1f2de50cf95bf1797d61ae94b3b04 files/folding.sh 88
 MD5 c4cfa6b5c8873285eda65eff62c0e26e files/init-5.0.2-r1 1188
 MD5 599d0e032a6eb16d6137a5fbcc1338e1 files/init-5.0.2-r2 1420
+MD5 e7e42d0a25e8b6ecb07ad7ad66eda0c3 files/init-5.0.2-r3 1435
 MD5 6c633c6cc20e087d9da4585c5d9563dc files/digest-foldingathome-4.0.0 66
 MD5 2f181dd626be0626fc9000536fd0d4c4 files/digest-foldingathome-5.0.2 61
 MD5 71ad6348b9f8b367f2417eddf75417c7 files/copy_client_config-5.0.2-r1 393
diff --git a/sci-biology/foldingathome/files/digest-foldingathome-5.0.2-r3 b/sci-biology/foldingathome/files/digest-foldingathome-5.0.2-r3
new file mode 100644
index 000000000000..44de62a3f7fd
--- /dev/null
+++ b/sci-biology/foldingathome/files/digest-foldingathome-5.0.2-r3
@@ -0,0 +1 @@
+MD5 4855e808fb94e6d2c5fde345aea0cdc3 FAH502-Linux.exe 249236
diff --git a/sci-biology/foldingathome/files/init-5.0.2-r3 b/sci-biology/foldingathome/files/init-5.0.2-r3
new file mode 100644
index 000000000000..c178ecfbdd62
--- /dev/null
+++ b/sci-biology/foldingathome/files/init-5.0.2-r3
@@ -0,0 +1,58 @@
+#!/sbin/runscript
+# Copyright 1999-2004 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/foldingathome/files/init-5.0.2-r3,v 1.1 2005/02/06 01:02:39 lostlogic Exp $
+
+opts="${opts} unitinfo"
+
+do_config() {
+	if [ -z "${CPU}" ] || [ "${CPU}" == "0" ]; then
+		if [ -r /proc/cpuinfo ]; then
+			CPU=`grep "^processor[[:space:]]*:" /proc/cpuinfo | wc -l`
+			if (( $CPU > 8 )); then
+				CPU=8
+			fi
+		else
+			CPU=1
+		fi
+	fi
+}
+
+unitinfo() {
+	do_config
+	for (($CPU; CPU > 0; CPU--)); do
+		einfo "CPU ${CPU} $(head -n1 /opt/foldingathome/client${CPU}/unitinfo.txt):"
+		sed -e '1,2d' /opt/foldingathome/client${CPU}/unitinfo.txt
+	done
+}
+
+start() {
+	do_config
+	su foldingathome -c /opt/foldingathome/copy_client_config
+	for (($CPU; CPU > 0; CPU--)); do
+		ebegin "Starting Folding@Home on CPU ${CPU}"
+		cd /opt/foldingathome/client${CPU}/
+		nice -n 20 su foldingathome -c "/opt/foldingathome/client${CPU}/foldingathome ${FOLD_OPTS}" &>/dev/null &
+		eend $?
+	done
+}
+
+stop() {
+	do_config
+	for (($CPU; CPU > 0; CPU--)); do
+		ebegin "Stopping Folding@Home on CPU ${CPU}"
+		cd /opt/foldingathome/client${CPU}/
+                for I in FahCore*.exe; do
+                        if ps ax|grep $I > /dev/null 2>&1; then
+				killall -q $I > /dev/null 2>&1
+			fi
+                done
+		sleep 1
+		if ps ax|grep '[/]opt[/]foldingathome/client${CPU}/' > /dev/null 2>&1; then
+			eend 1
+		else
+			eend 0
+		fi
+        done
+}
+
diff --git a/sci-biology/foldingathome/foldingathome-5.0.2-r3.ebuild b/sci-biology/foldingathome/foldingathome-5.0.2-r3.ebuild
new file mode 100644
index 000000000000..753e1677c5b1
--- /dev/null
+++ b/sci-biology/foldingathome/foldingathome-5.0.2-r3.ebuild
@@ -0,0 +1,79 @@
+# Copyright 1999-2005 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/foldingathome/foldingathome-5.0.2-r3.ebuild,v 1.1 2005/02/06 01:02:39 lostlogic Exp $
+
+# no version number on this install dir since upgrades will be using same dir
+# (data will be stored here too)
+I="/opt/foldingathome"
+
+inherit eutils
+
+DESCRIPTION="Help simulate protein folding at home"
+HOMEPAGE="http://folding.stanford.edu/"
+SRC_URI="http://www.stanford.edu/group/pandegroup/release/FAH502-Linux.exe"
+RESTRICT="nomirror"
+
+SLOT="0"
+IUSE=""
+LICENSE="as-is"
+KEYWORDS="~x86 ~amd64"
+
+DEPEND=">=sys-apps/baselayout-1.8.0
+	>=sys-libs/glibc-2.3.0
+	amd64? ( app-emulation/emul-linux-x86-baselibs )"
+
+S="${WORKDIR}"
+
+src_unpack() {
+		cp "${DISTDIR}/${A}" ${PN}
+}
+
+src_install() {
+	exeinto ${I}
+	newexe ${FILESDIR}/initfolding-r2 initfolding
+	newexe ${FILESDIR}/copy_client_config-${PV}-r1 copy_client_config
+
+	# Clients
+	exeinto ${I}/client1
+	doexe foldingathome
+	exeinto ${I}/client2
+	doexe foldingathome
+	exeinto ${I}/client3
+	doexe foldingathome
+	exeinto ${I}/client4
+	doexe foldingathome
+	exeinto ${I}/client5
+	doexe foldingathome
+	exeinto ${I}/client6
+	doexe foldingathome
+	exeinto ${I}/client7
+	doexe foldingathome
+	exeinto ${I}/client8
+	doexe foldingathome
+	exeinto /etc/init.d
+	newexe ${FILESDIR}/init-${PVR} foldingathome
+
+	insinto /etc/conf.d
+	newins ${FILESDIR}/folding-conf.d-r1 foldingathome
+}
+
+pkg_preinst() {
+	# the bash shell is important for "su -c" in init script
+	enewuser foldingathome -1 /bin/bash /opt/foldingathome
+}
+
+pkg_postinst() {
+	chown -R foldingathome:nogroup /opt/foldingathome
+	einfo "To run Folding@home in the background at boot:"
+	einfo " rc-update add foldingathome default"
+	einfo ""
+	einfo "Please run ${I}/initfolding to configure your client"
+	einfo "and edit /etc/conf.d/foldingathome for options"
+	einfo ""
+}
+
+pkg_postrm() {
+	einfo "Folding@home data files were not removed."
+	einfo " Remove them manually from ${I}"
+	einfo ""
+}