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authorJustin Lecher <jlec@gentoo.org>2013-02-20 16:09:03 +0000
committerJustin Lecher <jlec@gentoo.org>2013-02-20 16:09:03 +0000
commit60252b5b25298c9f887662b5094b98f472bd4c37 (patch)
treed167085aa994ca979bea485239fa97969139095f /sci-biology/allpathslg
parentStable for x86, wrt bug #458206 (diff)
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sci-biology/allpathslg: Drop old
(Portage version: 2.2.0_alpha163/cvs/Linux x86_64, signed Manifest commit with key 70EB7916)
Diffstat (limited to 'sci-biology/allpathslg')
-rw-r--r--sci-biology/allpathslg/ChangeLog5
-rw-r--r--sci-biology/allpathslg/allpathslg-37578.ebuild36
2 files changed, 4 insertions, 37 deletions
diff --git a/sci-biology/allpathslg/ChangeLog b/sci-biology/allpathslg/ChangeLog
index f62aeb7d0592..bd1154e01376 100644
--- a/sci-biology/allpathslg/ChangeLog
+++ b/sci-biology/allpathslg/ChangeLog
@@ -1,6 +1,9 @@
# ChangeLog for sci-biology/allpathslg
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/ChangeLog,v 1.12 2013/02/20 15:56:10 ago Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/ChangeLog,v 1.13 2013/02/20 16:09:03 jlec Exp $
+
+ 20 Feb 2013; Justin Lecher <jlec@gentoo.org> -allpathslg-37578.ebuild:
+ Drop old
20 Feb 2013; Agostino Sarubbo <ago@gentoo.org> allpathslg-42337.ebuild:
Stable for amd64, wrt bug #458106
diff --git a/sci-biology/allpathslg/allpathslg-37578.ebuild b/sci-biology/allpathslg/allpathslg-37578.ebuild
deleted file mode 100644
index b57bde0cab0a..000000000000
--- a/sci-biology/allpathslg/allpathslg-37578.ebuild
+++ /dev/null
@@ -1,36 +0,0 @@
-# Copyright 1999-2012 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/allpathslg-37578.ebuild,v 1.6 2012/12/14 09:57:17 ulm Exp $
-
-EAPI="2"
-
-inherit autotools flag-o-matic
-
-DESCRIPTION="De novo assembly of whole-genome shotgun microreads"
-HOMEPAGE="http://www.broadinstitute.org/science/programs/genome-biology/crd"
-SRC_URI="ftp://ftp.broadinstitute.org/pub/crd/ALLPATHS/Release-LG/latest_source_code/${P}.tar.gz"
-
-LICENSE="MIT"
-SLOT="0"
-IUSE=""
-KEYWORDS="amd64"
-
-DEPEND="
- dev-libs/boost
- !sci-biology/allpaths
- sci-biology/vaal"
-RDEPEND=""
-
-src_prepare() {
- filter-ldflags -Wl,--as-needed
- sed -i 's/-ggdb3//' configure.ac || die
- eautoreconf
-}
-
-src_install() {
- einstall || die
- # Provided by sci-biology/vaal
- for i in QueryLookupTable ScaffoldAccuracy MakeLookupTable Fastb ShortQueryLookup; do
- rm "${D}/usr/bin/$i" || die
- done
-}