--- src/Makefile	2008-03-09 22:59:51.000000000 +0100
+++ src/Makefile.new	2009-04-09 12:31:38.669457918 +0200
@@ -6,9 +6,7 @@
 #### CFLAGS	Flags to pass to C compiler.
 
 INCDIR		= .
-CC		= cc
 
-CFLAGS		= -O
 LIBS		= -lm
 
 all:		psipred psipass2 seq2mtx pfilt
@@ -20,13 +18,13 @@
 		/bin/rm -f psipred psipass2 seq2mtx pfilt
 
 psipred:	sspred_avpred.c ssdefs.h sspred_net.h
-		$(CC) $(CFLAGS) sspred_avpred.c $(LIBS) -o psipred
+		$(CC) $(CFLAGS) $(LDFLAGS) sspred_avpred.c $(LIBS) -o psipred
 
 psipass2:	sspred_hmulti.c ssdefs.h sspred_net2.h
-		$(CC) $(CFLAGS) sspred_hmulti.c $(LIBS) -o psipass2
+		$(CC) $(CFLAGS) $(LDFLAGS) sspred_hmulti.c $(LIBS) -o psipass2
 
 seq2mtx:	seq2mtx.c
-		$(CC) $(CFLAGS) seq2mtx.c $(LIBS) -o seq2mtx
+		$(CC) $(CFLAGS) $(LDFLAGS) seq2mtx.c $(LIBS) -o seq2mtx
 
 pfilt:		pfilt.c
-		$(CC) $(CFLAGS) pfilt.c $(LIBS) -o pfilt
+		$(CC) $(CFLAGS) $(LDFLAGS) pfilt.c $(LIBS) -o pfilt
--- src/Makefile	2009-04-09 12:34:41.636939862 +0200
+++ src/Makefile.new	2009-04-09 12:36:03.796098341 +0200
@@ -12,7 +12,8 @@
 all:		psipred psipass2 seq2mtx pfilt
 
 install:
-		/bin/cp psipred psipass2 seq2mtx pfilt ../bin
+		/bin/mkdir -p $(DESTDIR)/usr/bin
+		/bin/cp psipred psipass2 seq2mtx pfilt $(DESTDIR)/usr/bin
 
 clean:
 		/bin/rm -f psipred psipass2 seq2mtx pfilt