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* sci-libs/suitesparse: keyworded 5.4.0 for ppc, bug #716982Sergei Trofimovich2020-05-061-1/+1
| | | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 RepoMan-Options: --include-arches="ppc" Signed-off-by: Sergei Trofimovich <slyfox@gentoo.org>
* sci-libs/klu: keyworded 1.3.9 for ppc, bug #716982Sergei Trofimovich2020-05-061-1/+1
| | | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 RepoMan-Options: --include-arches="ppc" Signed-off-by: Sergei Trofimovich <slyfox@gentoo.org>
* sci-libs/cantera: fix sci-libs/sundials-5.2.0 compatibilitySergey Torokhov2020-05-052-24/+41
| | | | | | | | | | | | | | Because of increased rate of releases of SUNDIALS package and as the 5.x branch currently doesn't break the Cantera the "*_sundials4.patch" is changed to allow <sundials-6.0. The restrictions for SUNDIALS 5.x version is now controlled by "cantera-2.4.0-r*.ebuild". The patch changes isn't affected the build process, therefore there is no patch renaming. Signed-off-by: Sergey Torokhov <torokhov-s-a@yandex.ru> Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/sundials: 5.2.0 version bumpSergey Torokhov2020-05-053-0/+86
| | | | | Signed-off-by: Sergey Torokhov <torokhov-s-a@yandex.ru> Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/cantera: Fix site-packages install pathsSergey Torokhov2020-05-052-3/+20
| | | | | | | | | Python 3.7 and 3.8 site-packages dirs are located under /lib for amd64 arch now (instead of /lib64 like for python2.7 and python3.6) so the changes for python installation patch is required. Signed-off-by: Sergey Torokhov <torokhov-s-a@yandex.ru> Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/cantera: Revision bump. Pass FFLAGS for FORTRANFLAGSSergey Torokhov2020-05-051-0/+131
| | | | | | | | FFLAGS env variable is passed now for FORTRANFLAGS compile option. FFLAGS is presented by default in profile (see https://bugs.gentoo.org/575446). Signed-off-by: Sergey Torokhov <torokhov-s-a@yandex.ru> Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/linbox: new C++ template library for linear algebra.Michael Orlitzky2020-05-044-0/+158
| | | | | | | | | | | | | This is a straightforward import of the sci-libs/linbox package from the sage-on-gentoo overlay where François Bissey has been maintaining it. Linbox is a dependency of SageMath, and users will soon be able to use the system copy of linbox; see ticket 29631 on the SageMath Trac instance. Having this in Gentoo will therefore avoid pointless rebuilds of linbox for our SageMath users. Closes: https://bugs.gentoo.org/227813 Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
* sci-libs/symengine: version bump to 0.6.0Matthias Maier2020-05-022-0/+82
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/geos: Drop 3.8.0-r1Andreas Sturmlechner2020-05-012-57/+0
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/ceres-solver: Drop 1.12.0Andreas Sturmlechner2020-05-013-99/+0
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/vtk: fix QA warningsMatthias Maier2020-05-012-4/+4
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/geos: x86 stable wrt bug #720176Agostino Sarubbo2020-05-011-1/+1
| | | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 RepoMan-Options: --include-arches="x86" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/geos: ppc64 stable wrt bug #720176Agostino Sarubbo2020-05-011-1/+1
| | | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 RepoMan-Options: --include-arches="ppc64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/geos: ppc stable wrt bug #720176Agostino Sarubbo2020-05-011-1/+1
| | | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 RepoMan-Options: --include-arches="ppc" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/geos: arm stable wrt bug #720176Agostino Sarubbo2020-05-011-1/+1
| | | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 RepoMan-Options: --include-arches="arm" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/geos: amd64 stable wrt bug #720176Agostino Sarubbo2020-05-011-1/+1
| | | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/scipy-python2: Bump to 1.2.3Pacho Ramos2020-05-012-0/+130
| | | | | Package-Manager: Portage-2.3.96, Repoman-2.3.22 Signed-off-by: Pacho Ramos <pacho@gentoo.org>
* sci-libs/vtk: version bump to 8.2.0Matthias Maier2020-05-012-0/+340
| | | | | | Closes: https://bugs.gentoo.org/684008 Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/vtk: remove bogus dependencyMatthias Maier2020-05-011-2/+1
| | | | | | Closes: https://bugs.gentoo.org/666058 Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/vtk: fix compilation with openmpi-4Matthias Maier2020-05-012-0/+20
| | | | | | Closes: https://bugs.gentoo.org/683382 Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/geos: arm64 stable (bug #720176)Sam James (sam_c)2020-05-011-1/+1
| | | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Sam James (sam_c) <sam@cmpct.info> Signed-off-by: Mart Raudsepp <leio@gentoo.org>
* sci-libs/ginkgo: improve ebuildMatthias Maier2020-04-304-18/+63
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/ginkgo: new packageMatthias Maier2020-04-304-0/+113
| | | | | | | This is a future reverse dependency of sci-libs/dealii Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/scalapack: version bump to 2.1.0Matthias Maier2020-04-292-0/+72
| | | | | | | | Closes: https://bugs.gentoo.org/511150 Closes: https://bugs.gentoo.org/675636 Closes: https://bugs.gentoo.org/684750 Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/proj: bump to 7.0.0Andrey Grozin2020-04-292-0/+49
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Andrey Grozin <grozin@gentoo.org>
* sci-libs/opencascade: Use $P instead of $PF for install directoryMatthias Maier2020-04-271-1/+1
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/vtk: Replace virtual/ffmpegDavid Seifert2020-04-261-1/+1
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/opencascade: Replace virtual/ffmpegDavid Seifert2020-04-261-1/+1
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/trilinos: fix installationMatthias Maier2020-04-241-2/+1
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/trilinos: fix DESTDIR and installationMatthias Maier2020-04-242-1/+8
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/trilinos: version bump to 12.18.1Matthias Maier2020-04-242-0/+210
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/metis: [QA] Do not install static libraryAlessandro Barbieri2020-04-243-0/+114
| | | | | | | | | | | | | * as per policy https://projects.gentoo.org/qa/policy-guide/installed-files.html?highlight=static#pg0302# * for more context: https://flameeyes.blog/2011/08/29/useless-flag-static-libs/ https://archives.gentoo.org/gentoo-dev/message/2dada80c2b9c85b0e83e6328428bf8ab Closes: https://github.com/gentoo/gentoo/pull/15490 Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Alessandro Barbieri <lssndrbarbieri@gmail.com> Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/linux-gpib-modules: Build against eselected sourcesAndreas K. Hüttel2020-04-241-0/+2
| | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Andreas K. Hüttel <dilfridge@gentoo.org>
* sci-libs/libsc: drop oldMatthias Maier2020-04-233-146/+0
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/p4est: drop oldMatthias Maier2020-04-233-202/+0
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/p4est: fix library pathMatthias Maier2020-04-233-9/+6
| | | | | | Closes: https://bugs.gentoo.org/680140 Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/cartopy: Add support for Python3.7Thomas Beierlein2020-04-231-1/+1
| | | | | | | | py3.8 has to wait until deps are supporting it. Closes: https://bugs.gentoo.org/718492 Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Thomas Beierlein <tomjbe@gentoo.org>
* sci-libs/kim-api: version bumpChristoph Junghans2020-04-232-0/+19
| | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Christoph Junghans <junghans@gentoo.org>
* sci-libs/pyshp: Version bump, add py3.7 and 3.8Thomas Beierlein2020-04-223-1/+30
| | | | | | | | Take maintainership of the package. Closes: https://bugs.gentoo.org/718500 Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Thomas Beierlein <tomjbe@gentoo.org>
* sci-libs/libgeodecomp: tidy ebuild for 0.5Joonas Niilola2020-04-211-3/+4
| | | | Signed-off-by: Joonas Niilola <juippis@gentoo.org>
* sci-libs/libgeodecomp: Drop oldKurt Kanzenbach2020-04-216-690/+0
| | | | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Kurt Kanzenbach <kurt@kmk-computers.de> Closes: https://github.com/gentoo/gentoo/pull/15443 Signed-off-by: Joonas Niilola <juippis@gentoo.org>
* sci-libs/libgeodecomp: Bump version to 0.5-pre20200420Kurt Kanzenbach2020-04-213-0/+374
| | | | | | | | That version contains bugfixes. Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Kurt Kanzenbach <kurt@kmk-computers.de> Signed-off-by: Joonas Niilola <juippis@gentoo.org>
* sci-libs/ceres-solver: amd64 stable wrt bug #716824Agostino Sarubbo2020-04-201-1/+1
| | | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/linux-gpib-modules: GLEP 81 fixesAndreas K. Hüttel2020-04-191-9/+1
| | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Andreas K. Hüttel <dilfridge@gentoo.org>
* sci-libs/linux-gpib: remove redundant dodirAndreas K. Hüttel2020-04-181-1/+0
| | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Andreas K. Hüttel <dilfridge@gentoo.org>
* sci-libs/linux-gpib: Remove oldAndreas K. Hüttel2020-04-186-288/+0
| | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Andreas K. Hüttel <dilfridge@gentoo.org>
* sci-libs/linux-gpib: Version bumpAndreas K. Hüttel2020-04-183-0/+189
| | | | | | Bug: https://bugs.gentoo.org/704294 Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Andreas K. Hüttel <dilfridge@gentoo.org>
* sci-libs/linux-gpib-modules: Version bumpAndreas K. Hüttel2020-04-183-0/+117
| | | | | | Bug: https://bugs.gentoo.org/704294 Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Andreas K. Hüttel <dilfridge@gentoo.org>
* sci-libs/votca-tools: version bumpChristoph Junghans2020-04-172-0/+45
| | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Christoph Junghans <junghans@gentoo.org>
* sci-libs/matio: Remove old versionsDavid Seifert2020-04-173-94/+0
| | | | | | Bug: https://bugs.gentoo.org/679476 Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: David Seifert <soap@gentoo.org>