1 files changed, 0 insertions, 60 deletions
diff --git a/sci-biology/mafft/mafft-7.050.ebuild b/sci-biology/mafft/mafft-7.050.ebuild
deleted file mode 100644
index 5da5d12d1b31..000000000000
--- a/sci-biology/mafft/mafft-7.050.ebuild
+++ /dev/null
@@ -1,60 +0,0 @@
-# Copyright 1999-2018 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-inherit eutils flag-o-matic multilib toolchain-funcs
-
-EXTENSIONS="-without-extensions"
-
-DESCRIPTION="Multiple sequence alignments using a variety of algorithms"
-HOMEPAGE="https://mafft.cbrc.jp/alignment/software/index.html"
-SRC_URI="https://mafft.cbrc.jp/alignment/software/${P}${EXTENSIONS}-src.tgz"
-
-LICENSE="BSD"
-SLOT="0"
-KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos"
-IUSE="threads"
-
-S="${WORKDIR}"/${P}${EXTENSIONS}
-
-src_prepare() {
-	epatch "${FILESDIR}"/${PN}-7.037-respect.patch
-	use threads && append-cppflags -Denablemultithread
-	sed "s:GENTOOLIBDIR:$(get_libdir):g" -i core/Makefile || die
-	sed -i -e "s/(PREFIX)\/man/(PREFIX)\/share\/man/" "${S}"/core/Makefile || die "sed failed"
-}
-
-src_compile() {
-	pushd core > /dev/null || die
-	emake \
-		$(usex threads ENABLE_MULTITHREAD="-Denablemultithread" ENABLE_MULTITHREAD="") \
-		PREFIX="${EPREFIX}"/usr \
-		CC="$(tc-getCC)" \
-		CFLAGS="${CFLAGS}"
-	popd > /dev/null || die
-}
-
-src_test() {
-	export MAFFT_BINARIES="${S}"/core
-	cd test || die
-	bash ../core/mafft sample > test.fftns2 || die
-	bash ../core/mafft --maxiterate 100  sample > test.fftnsi || die
-	bash ../core/mafft --globalpair sample > test.gins1 || die
-	bash ../core/mafft --globalpair --maxiterate 100  sample > test.ginsi || die
-	bash ../core/mafft --localpair sample > test.lins1 || die
-	bash ../core/mafft --localpair --maxiterate 100  sample > test.linsi || die
-
-	diff test.fftns2 sample.fftns2 || die
-	diff test.fftnsi sample.fftnsi || die
-	diff test.gins1 sample.gins1 || die
-	diff test.ginsi sample.ginsi || die
-	diff test.lins1 sample.lins1 || die
-}
-
-src_install() {
-	pushd core
-	emake PREFIX="${ED}usr" install
-	popd
-	dodoc readme
-}