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Diffstat (limited to 'dev-haskell/bio/metadata.xml')
| -rw-r--r-- | dev-haskell/bio/metadata.xml | 22 |
1 files changed, 22 insertions, 0 deletions
diff --git a/dev-haskell/bio/metadata.xml b/dev-haskell/bio/metadata.xml new file mode 100644 index 000000000000..c7052f420878 --- /dev/null +++ b/dev-haskell/bio/metadata.xml @@ -0,0 +1,22 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <herd>haskell</herd> + <longdescription> + This is a collection of data structures and algorithms + useful for building bioinformatics-related tools + and utilities. + + Current list of features includes: a Sequence data type supporting + protein and nucleotide sequences and conversion between them. As of version + 0.4, different kinds of sequence have different types. Support for quality + data, reading and writing Fasta formatted files, reading TwoBit and + phd formats, and Roche/454 SFF files. Rudimentary (i.e. unoptimized) support + for doing alignments - including dynamic adjustment of scores based on sequence quality. + Also Blast output parsing. Partly implemented single linkage clustering, and + multiple alignment. Reading Gene Ontology (GO) annotations (GOA) and + definitions\/hierarchy. + + The Darcs repository is at: <http://malde.org/~ketil/biohaskell/biolib>. + </longdescription> +</pkgmetadata> |