diff options
| -rw-r--r-- | sci-biology/express/express-1.5.1.ebuild | 3 | ||||
| -rw-r--r-- | sci-biology/express/files/express-1.5.1-gcc6.patch | 19 |
2 files changed, 21 insertions, 1 deletions
diff --git a/sci-biology/express/express-1.5.1.ebuild b/sci-biology/express/express-1.5.1.ebuild index 5a7ef2f98f0c..62e5361f529f 100644 --- a/sci-biology/express/express-1.5.1.ebuild +++ b/sci-biology/express/express-1.5.1.ebuild @@ -1,4 +1,4 @@ -# Copyright 1999-2014 Gentoo Foundation +# Copyright 1999-2017 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 EAPI=5 @@ -26,6 +26,7 @@ S="${WORKDIR}/${P}-src" PATCHES=( "${FILESDIR}"/${P}-buildsystem.patch + "${FILESDIR}"/${P}-gcc6.patch ) src_configure() { diff --git a/sci-biology/express/files/express-1.5.1-gcc6.patch b/sci-biology/express/files/express-1.5.1-gcc6.patch new file mode 100644 index 000000000000..8a608b97b056 --- /dev/null +++ b/sci-biology/express/files/express-1.5.1-gcc6.patch @@ -0,0 +1,19 @@ +Bug: https://bugs.gentoo.org/610692 + +--- a/src/targets.cpp ++++ b/src/targets.cpp +@@ -113,12 +113,12 @@ + + double ll = LOG_1; + double tot_mass = mass(with_pseudo); +- double tot_eff_len = cached_effective_length(lib.bias_table); ++ double tot_eff_len = cached_effective_length(static_cast<bool>(lib.bias_table)); + if (neighbors) { + foreach (const Target* neighbor, *neighbors) { + tot_mass = log_add(tot_mass, neighbor->mass(with_pseudo)); + tot_eff_len = log_add(tot_eff_len, +- neighbor->cached_effective_length(lib.bias_table)); ++ neighbor->cached_effective_length(static_cast<bool>(lib.bias_table))); + } + } + ll += tot_mass - tot_eff_len; |