2018-10-14 20:04:29 UTC

4 files changed, 3 insertions, 42 deletions

diff --git a/metadata/md5-cache/sci-chemistry/openbabel-2.3.2-r1 b/metadata/md5-cache/sci-chemistry/openbabel-2.3.2-r1
deleted file mode 100644
index 59ff5e1f7132..000000000000
--- a/metadata/md5-cache/sci-chemistry/openbabel-2.3.2-r1
+++ /dev/null
@@ -1,13 +0,0 @@
-DEFINED_PHASES=compile configure install postinst prepare setup test
-DEPEND=dev-cpp/eigen:3 dev-libs/libxml2:2 sci-libs/inchi sys-libs/zlib wxwidgets? ( x11-libs/wxGTK:3.0[X] ) >=dev-util/cmake-2.4.8 doc? ( app-doc/doxygen ) sys-devel/make >=dev-util/cmake-3.9.6
-DESCRIPTION=Interconverts file formats used in molecular modeling
-EAPI=5
-HOMEPAGE=http://openbabel.sourceforge.net/
-IUSE=doc openmp test wxwidgets
-KEYWORDS=amd64 ~arm x86 ~amd64-linux ~x86-linux ~ppc-macos
-LICENSE=GPL-2
-RDEPEND=dev-cpp/eigen:3 dev-libs/libxml2:2 sci-libs/inchi sys-libs/zlib wxwidgets? ( x11-libs/wxGTK:3.0[X] )
-SLOT=0
-SRC_URI=mirror://sourceforge/openbabel/openbabel-2.3.2.tar.gz
-_eclasses_=cmake-utils	f0bc1c175684130a76ab6c17f575d820	desktop	b1d22ac8bdd4679ab79c71aca235009d	epatch	a1bf4756dba418a7238f3be0cb010c54	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	6e6c2737b59a4b982de6fb3ecefd87f8	flag-o-matic	55aaa148741116aa54ad0d80e361818e	ltprune	08f9e1d9ee0af8f5d9a7854efbcd8c0e	multilib	b2f01ad412baf81650c23fcf0975fa33	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	132cbb376048d079b5a012f5467c4e7f	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	f164325a2cdb5b3ea39311d483988861	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	wxwidgets	ed63935305b6de2210ae97a407719d89	xdg-utils	93b2dfbb00a09161e1e7f6360c0f7f6b
-_md5_=d880844fba044836488350725d6a444f
diff --git a/metadata/md5-cache/sci-chemistry/openbabel-perl-2.3.2 b/metadata/md5-cache/sci-chemistry/openbabel-perl-2.3.2
deleted file mode 100644
index 8e28c1297d72..000000000000
--- a/metadata/md5-cache/sci-chemistry/openbabel-perl-2.3.2
+++ /dev/null
@@ -1,12 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test unpack
-DEPEND=dev-lang/perl:= ~sci-chemistry/openbabel-2.3.2 >=dev-util/cmake-2.4.8 >=dev-lang/swig-2 sys-devel/make >=dev-util/cmake-3.9.6 dev-lang/perl:=[-build(-)]
-DESCRIPTION=Perl bindings for OpenBabel
-EAPI=5
-HOMEPAGE=http://openbabel.sourceforge.net/
-KEYWORDS=amd64 ~arm x86 ~amd64-linux ~x86-linux
-LICENSE=GPL-2
-RDEPEND=dev-lang/perl:= ~sci-chemistry/openbabel-2.3.2 dev-lang/perl:=[-build(-)]
-SLOT=0
-SRC_URI=mirror://sourceforge/openbabel/openbabel-2.3.2.tar.gz
-_eclasses_=cmake-utils	f0bc1c175684130a76ab6c17f575d820	desktop	b1d22ac8bdd4679ab79c71aca235009d	epatch	a1bf4756dba418a7238f3be0cb010c54	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	6e6c2737b59a4b982de6fb3ecefd87f8	flag-o-matic	55aaa148741116aa54ad0d80e361818e	ltprune	08f9e1d9ee0af8f5d9a7854efbcd8c0e	multilib	b2f01ad412baf81650c23fcf0975fa33	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	132cbb376048d079b5a012f5467c4e7f	perl-functions	f2e3420aed32cf1abe33b4129b842636	perl-module	0bd80b082268528830da0d72ac571d9a	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	f164325a2cdb5b3ea39311d483988861	unpacker	ee2f5086cd7e7b747b061f58db14d89e	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	xdg-utils	93b2dfbb00a09161e1e7f6360c0f7f6b
-_md5_=7d40af4aa49703f526c8935423380ead
diff --git a/metadata/md5-cache/sci-chemistry/openbabel-python-2.3.2 b/metadata/md5-cache/sci-chemistry/openbabel-python-2.3.2
deleted file mode 100644
index c9b818711f70..000000000000
--- a/metadata/md5-cache/sci-chemistry/openbabel-python-2.3.2
+++ /dev/null
@@ -1,14 +0,0 @@
-DEFINED_PHASES=compile configure install prepare test
-DEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) python_targets_python3_4? ( dev-lang/python:3.4 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,python_targets_python3_4(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-)] ~sci-chemistry/openbabel-2.3.2 sys-libs/zlib >=dev-lang/swig-2 sys-devel/make >=dev-util/cmake-3.9.6
-DESCRIPTION=Python bindings for OpenBabel (including Pybel)
-EAPI=5
-HOMEPAGE=http://openbabel.sourceforge.net/
-IUSE=python_targets_python2_7 python_targets_python3_4
-KEYWORDS=amd64 ~arm x86 ~amd64-linux ~x86-linux
-LICENSE=GPL-2
-RDEPEND=python_targets_python2_7? ( >=dev-lang/python-2.7.5-r2:2.7 ) python_targets_python3_4? ( dev-lang/python:3.4 ) >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,python_targets_python3_4(-)?,-python_single_target_python2_7(-),-python_single_target_python3_4(-)] ~sci-chemistry/openbabel-2.3.2 sys-libs/zlib
-REQUIRED_USE=|| ( python_targets_python2_7 python_targets_python3_4 )
-SLOT=0
-SRC_URI=mirror://sourceforge/openbabel/openbabel-2.3.2.tar.gz
-_eclasses_=cmake-utils	f0bc1c175684130a76ab6c17f575d820	desktop	b1d22ac8bdd4679ab79c71aca235009d	epatch	a1bf4756dba418a7238f3be0cb010c54	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	6e6c2737b59a4b982de6fb3ecefd87f8	flag-o-matic	55aaa148741116aa54ad0d80e361818e	ltprune	08f9e1d9ee0af8f5d9a7854efbcd8c0e	multibuild	40fe59465edacd730c644ec2bc197809	multilib	b2f01ad412baf81650c23fcf0975fa33	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	132cbb376048d079b5a012f5467c4e7f	preserve-libs	ef207dc62baddfddfd39a164d9797648	python-r1	ce1cd23cfdc1848e8e32743efe34f299	python-utils-r1	12114a2a9aab35b93efc037a196b3234	toolchain-funcs	f164325a2cdb5b3ea39311d483988861	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	xdg-utils	93b2dfbb00a09161e1e7f6360c0f7f6b
-_md5_=3f5ab0b18673814af37849f1890bfb74
diff --git a/metadata/md5-cache/sci-chemistry/tm-align-20150914 b/metadata/md5-cache/sci-chemistry/tm-align-20150914
index d273814c79e4..9b44e650d81e 100644
--- a/metadata/md5-cache/sci-chemistry/tm-align-20150914
+++ b/metadata/md5-cache/sci-chemistry/tm-align-20150914
@@ -1,13 +1,13 @@
 DEFINED_PHASES=compile configure install prepare setup test
 DEPEND=sys-devel/make >=dev-util/cmake-3.9.6 virtual/fortran
 DESCRIPTION=Quick & Accurate Structural Alignment
-EAPI=5
+EAPI=6
 HOMEPAGE=http://zhanglab.ccmb.med.umich.edu/TM-align/
-IUSE=static custom-cflags
+IUSE=custom-cflags static
 KEYWORDS=~amd64 ~ppc ~ppc64 ~x86 ~amd64-linux ~x86-linux
 LICENSE=tm-align
 RDEPEND=virtual/fortran
 SLOT=0
 SRC_URI=http://zhanglab.ccmb.med.umich.edu/TM-align/TMtools20150914.tar.gz
 _eclasses_=cmake-utils	f0bc1c175684130a76ab6c17f575d820	desktop	b1d22ac8bdd4679ab79c71aca235009d	epatch	a1bf4756dba418a7238f3be0cb010c54	estack	43ddf5aaffa7a8d0482df54d25a66a1f	eutils	6e6c2737b59a4b982de6fb3ecefd87f8	flag-o-matic	55aaa148741116aa54ad0d80e361818e	fortran-2	68fcf50e02640de6eb5698ea038d9537	ltprune	08f9e1d9ee0af8f5d9a7854efbcd8c0e	multilib	b2f01ad412baf81650c23fcf0975fa33	multiprocessing	cac3169468f893670dac3e7cb940e045	ninja-utils	132cbb376048d079b5a012f5467c4e7f	preserve-libs	ef207dc62baddfddfd39a164d9797648	toolchain-funcs	f164325a2cdb5b3ea39311d483988861	vcs-clean	2a0f74a496fa2b1552c4f3398258b7bf	xdg-utils	93b2dfbb00a09161e1e7f6360c0f7f6b
-_md5_=dffd0173b777f1622e966e7bd1838993
+_md5_=08a927047f90fc7a0cb48abbf9937896