From a7d3c80ea6657ed00c3058d6ca6133d2058ff048 Mon Sep 17 00:00:00 2001
From: Andrey Kislyuk <weaver@gentoo.org>
Date: Mon, 20 Sep 2010 04:50:54 +0000
Subject: Version bump. Addresses boost problems and compilation issues
 (Portage version: 2.2_rc61/cvs/Linux x86_64)

---
 sci-biology/vaal/vaal-1.6.ebuild | 37 +++++++++++++++++++++++++++++++++++++
 1 file changed, 37 insertions(+)
 create mode 100644 sci-biology/vaal/vaal-1.6.ebuild

(limited to 'sci-biology/vaal/vaal-1.6.ebuild')

diff --git a/sci-biology/vaal/vaal-1.6.ebuild b/sci-biology/vaal/vaal-1.6.ebuild
new file mode 100644
index 000000000000..9d6c01769235
--- /dev/null
+++ b/sci-biology/vaal/vaal-1.6.ebuild
@@ -0,0 +1,37 @@
+# Copyright 1999-2010 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/vaal/vaal-1.6.ebuild,v 1.1 2010/09/20 04:50:54 weaver Exp $
+
+EAPI="2"
+
+inherit base autotools
+
+DESCRIPTION="A variant ascertainment algorithm that can be used to detect SNPs, indels, and other polymorphisms"
+HOMEPAGE="http://www.broadinstitute.org/science/programs/genome-biology/crd"
+SRC_URI="ftp://ftp.broad.mit.edu/pub/crd/VAAL/VAAL.${PV}.tgz
+	ftp://ftp.broad.mit.edu/pub/crd/VAAL/VAAL_manual.doc"
+
+LICENSE="Whitehead-MIT"
+SLOT="0"
+IUSE=""
+KEYWORDS="~amd64 ~x86"
+
+DEPEND=">=dev-libs/boost-1.41.0-r3"
+RDEPEND="${DEPEND}"
+
+PATCHES=(
+	"${FILESDIR}"/${P}-respect-flags.patch
+)
+
+S="${WORKDIR}/vaal-33805"
+
+src_prepare() {
+	base_src_prepare
+	eautoreconf
+}
+
+src_install() {
+	einstall || die
+	insinto /usr/share/doc/${PF}
+	doins "${DISTDIR}/VAAL_manual.doc"
+}
-- 
cgit v1.2.3-65-gdbad