From 6a1c30e11ffc4df24ec4d961f5f2c2f3165b7f66 Mon Sep 17 00:00:00 2001
From: Andrey Kislyuk <weaver@gentoo.org>
Date: Fri, 7 May 2010 19:21:57 +0000
Subject: Version bump (Portage version: 2.2_rc67/cvs/Linux x86_64)

---
 sci-biology/bfast/ChangeLog           |  8 ++++++-
 sci-biology/bfast/bfast-0.6.2a.ebuild | 39 -----------------------------------
 sci-biology/bfast/bfast-0.6.4c.ebuild | 35 +++++++++++++++++++++++++++++++
 3 files changed, 42 insertions(+), 40 deletions(-)
 delete mode 100644 sci-biology/bfast/bfast-0.6.2a.ebuild
 create mode 100644 sci-biology/bfast/bfast-0.6.4c.ebuild

(limited to 'sci-biology/bfast')

diff --git a/sci-biology/bfast/ChangeLog b/sci-biology/bfast/ChangeLog
index 834b828f7a16..992cbbd3d743 100644
--- a/sci-biology/bfast/ChangeLog
+++ b/sci-biology/bfast/ChangeLog
@@ -1,6 +1,12 @@
 # ChangeLog for sci-biology/bfast
 # Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bfast/ChangeLog,v 1.2 2010/04/18 23:41:05 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bfast/ChangeLog,v 1.3 2010/05/07 19:21:57 weaver Exp $
+
+*bfast-0.6.4c (07 May 2010)
+
+  07 May 2010; Andrey Kislyuk <weaver@gentoo.org> -bfast-0.6.2a.ebuild,
+  +bfast-0.6.4c.ebuild:
+  Version bump
 
 *bfast-0.6.4b (18 Apr 2010)
 
diff --git a/sci-biology/bfast/bfast-0.6.2a.ebuild b/sci-biology/bfast/bfast-0.6.2a.ebuild
deleted file mode 100644
index 61b317c3442c..000000000000
--- a/sci-biology/bfast/bfast-0.6.2a.ebuild
+++ /dev/null
@@ -1,39 +0,0 @@
-# Copyright 1999-2010 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bfast/bfast-0.6.2a.ebuild,v 1.1 2010/01/21 18:25:31 weaver Exp $
-
-EAPI="2"
-
-inherit autotools
-
-DESCRIPTION="Blat-like Fast Accurate Search Tool"
-HOMEPAGE="http://genome.ucla.edu/bfast"
-SRC_URI="mirror://sourceforge/${PN}/${P}.tar.gz"
-
-LICENSE="GPL-2"
-SLOT="0"
-IUSE=""
-KEYWORDS="~amd64 ~x86"
-
-DEPEND=""
-RDEPEND="dev-perl/XML-Simple"
-
-src_prepare() {
-	sed -i -e 's/-m64//' \
-		-e 's/CFLAGS="${default_CFLAGS} ${extended_CFLAGS}"/CFLAGS="${CFLAGS} ${default_CFLAGS} ${extended_CFLAGS}"/' \
-		configure.ac || die
-	eautoreconf
-}
-
-src_install() {
-	einstall || die
-	dodoc AUTHORS NEWS README
-}
-
-src_test() {
-	# not sure why this is necessary
-	sed -i 's|test.definitions.sh|./test.definitions.sh|' tests/*.sh
-	# problems with checksum matching - also not sure why
-	sed -i '/test.diff.sh/ d' tests/Makefile
-	emake check || die
-}
diff --git a/sci-biology/bfast/bfast-0.6.4c.ebuild b/sci-biology/bfast/bfast-0.6.4c.ebuild
new file mode 100644
index 000000000000..6bbf9ea164ce
--- /dev/null
+++ b/sci-biology/bfast/bfast-0.6.4c.ebuild
@@ -0,0 +1,35 @@
+# Copyright 1999-2010 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bfast/bfast-0.6.4c.ebuild,v 1.1 2010/05/07 19:21:57 weaver Exp $
+
+EAPI="2"
+
+inherit autotools
+
+DESCRIPTION="Blat-like Fast Accurate Search Tool"
+HOMEPAGE="https://sourceforge.net/projects/bfast/"
+SRC_URI="mirror://sourceforge/${PN}/${P}.tar.gz"
+
+LICENSE="GPL-2"
+SLOT="0"
+IUSE=""
+KEYWORDS="~amd64 ~x86"
+
+DEPEND=""
+RDEPEND="dev-perl/XML-Simple"
+
+src_prepare() {
+	sed -i -e 's/-m64//' \
+		-e 's/CFLAGS="${default_CFLAGS} ${extended_CFLAGS}"/CFLAGS="${CFLAGS} ${default_CFLAGS} ${extended_CFLAGS}"/' \
+		configure.ac || die
+	eautoreconf
+}
+
+src_install() {
+	einstall || die
+	dodoc AUTHORS NEWS README
+}
+
+src_test() {
+	emake check || die
+}
-- 
cgit v1.2.3-65-gdbad